Pathways Knowlegdes

Biological pathway database

Pathway DOIs Note
inosine 5'-phosphate degradation

Accession ID: BioCyc:AURANTIMONAS_PWY-5695		 -
purine nucleotides degradation II (aerobic)

Accession ID: BioCyc:MOUSE_PWY-6353		 -
salvage pathways of adenine, hypoxanthine, and their nucleosides

Accession ID: BioCyc:SMAN_SALVADEHYPOX-PWY		 -
ureide biosynthesis

Accession ID: BioCyc:SCO_URSIN-PWY
  • 10.1016/s1476-9271(02)00094-4
  • 10.1074/jbc.m701297200
  • 10.1093/nar/28.1.27
 Cendron L, Berni R, Folli C, Ramazzina I, Percudani R, Zanotti G. The Structure of 2-Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline Decarboxylase Provides Insights into the Mechanism of Uric Acid Degradation. Journal of Biological Chemistry. 2007 Jun;282(25):18182–9. doi: 10.1074/jbc.m701297200.; Gattiker A, Michoud K, Rivoire C, Auchincloss AH, Coudert E, Lima T, Kersey P, Pagni M, Sigrist CJA, Lachaize C, Veuthey A, Gasteiger E, Bairoch A. Automated annotation of microbial proteomes in SWISS-PROT. Computational Biology and Chemistry. 2003 Feb;27(1):49–58. doi: 10.1016/s1476-9271(02)00094-4.; Kanehisa M, Goto S. KEGG: kyoto encyclopedia of genes and genomes. Nucleic Acids Res. 2000 Jan 01;28(1):27–30. PMID: 10592173; PMCID: PMC102409.
purine nucleotides degradation I (plants)

Accession ID: BioCyc:SCO_PWY-5044
  • 10.1016/s1476-9271(02)00094-4
  • 10.1093/nar/28.1.27
 Gattiker A, Michoud K, Rivoire C, Auchincloss AH, Coudert E, Lima T, Kersey P, Pagni M, Sigrist CJA, Lachaize C, Veuthey A, Gasteiger E, Bairoch A. Automated annotation of microbial proteomes in SWISS-PROT. Computational Biology and Chemistry. 2003 Feb;27(1):49–58. doi: 10.1016/s1476-9271(02)00094-4.; Kanehisa M, Goto S. KEGG: kyoto encyclopedia of genes and genomes. Nucleic Acids Res. 2000 Jan 01;28(1):27–30. PMID: 10592173; PMCID: PMC102409.
superpathway of guanosine nucleotides degradation (plants)

Accession ID: BioCyc:SCO_PWY-6595
  • 10.1093/nar/28.1.27
 Kanehisa M, Goto S. KEGG: kyoto encyclopedia of genes and genomes. Nucleic Acids Res. 2000 Jan 01;28(1):27–30. PMID: 10592173; PMCID: PMC102409.
urate biosynthesis/inosine 5'-phosphate degradation

Accession ID: BioCyc:SCO_PWY-5695
  • 10.1016/s1476-9271(02)00094-4
  • 10.1093/nar/28.1.27
 Gattiker A, Michoud K, Rivoire C, Auchincloss AH, Coudert E, Lima T, Kersey P, Pagni M, Sigrist CJA, Lachaize C, Veuthey A, Gasteiger E, Bairoch A. Automated annotation of microbial proteomes in SWISS-PROT. Computational Biology and Chemistry. 2003 Feb;27(1):49–58. doi: 10.1016/s1476-9271(02)00094-4.; Kanehisa M, Goto S. KEGG: kyoto encyclopedia of genes and genomes. Nucleic Acids Res. 2000 Jan 01;28(1):27–30. PMID: 10592173; PMCID: PMC102409.
purine nucleobases degradation I (anaerobic)

Accession ID: BioCyc:SCO_P164-PWY
  • 10.1093/nar/28.1.27
 Kanehisa M, Goto S. KEGG: kyoto encyclopedia of genes and genomes. Nucleic Acids Res. 2000 Jan 01;28(1):27–30. PMID: 10592173; PMCID: PMC102409.
adenosine nucleotides degradation II

Accession ID: BioCyc:BSUB_SALVADEHYPOX-PWY		 -
xanthine and xanthosine salvage

Accession ID: BioCyc:FLY_SALVPURINE2-PWY		 -
xanthine and xanthosine salvage

Accession ID: BioCyc:ECOL316407_SALVPURINE2-PWY		 -
purine ribonucleosides degradation

Accession ID: BioCyc:ECOL413997_PWY0-1296		 -
xanthine and xanthosine salvage

Accession ID: BioCyc:ECOL413997_SALVPURINE2-PWY		 -
adenosine nucleotides degradation II

Accession ID: BioCyc:MOB3B_SALVADEHYPOX-PWY		 -
xanthine and xanthosine salvage

Accession ID: BioCyc:10403S_RAST_SALVPURINE2-PWY		 -
purine nucleotides degradation IV (anaerobic)

Accession ID: BioCyc:10403S_RAST_PWY-5497		 -
purine ribonucleosides degradation to ribose-1-phosphate

Accession ID: BioCyc:THAPS_PWY0-1296		 -
purine nucleotides degradation IV (anaerobic)

Accession ID: BioCyc:THAPS_PWY-5497		 -
guanosine nucleotides degradation III

Accession ID: BioCyc:THAPS_PWY-6608		 -
purine ribonucleosides degradation

Accession ID: BioCyc:PDIF272563_PWY0-1296		 -