Metabolite List
View list of the metabolites in data page 1
Activated tRNA (BioCAD00000000001)
Formula: n/a (Exact Mass: )
Short Abstract: "Activated" tRNA, more precisely termed aminoacyl-tRNA, is the functional form generated when an amino acid is covalently attached to its cognate tRNA by aminoacyl-tRNA synthetases (using ATP). This activation step (aminoacylation) is essential for accurate protein synthesis during translation. The aminoacyl-tRNA delivers the correct amino acid to the ribosome's A-site, guided by mRNA codon-anticodon pairing, ensuring faithful incorporation into the growing polypeptide chain according to the genetic code. Without this activation, ribosomal translation would lack specificity and fidelity.
(-)-3-exo-Hydroxycamphor (BioCAD00000000002)
Formula: C10H16O2 (Exact Mass: 168.115)
(-)-3-exo-Hydroxycamphor is not a recognized natural metabolite or biologically active compound with established physiological roles. It appears to be a misidentified or synthetic derivative of camphor. The well-documented biological context involves microbial degradation pathways (e.g., in Pseudomonas putida), where camphor is primarily metabolized to 5-hydroxycamphor (not 3-exo-hydroxycamphor) via a specific monooxygenase enzyme. The 3-exo position in camphor is sterically hindered and not a typical site for enzymatic hydroxylation. Thus, (-)-3-exo-hydroxycamphor lacks evidence of natural occurrence, metabolic significance, or defined biological function in living systems. Its mention likely stems from confusion with authentic degradation intermediates or synthetic chemistry contexts.
(Abstract word count: 98)
(-)-5-Epieremophilene (BioCAD00000000003)
Formula: C15H24 (Exact Mass: 204.1878)
(-)-5-Epieremophilene is a minor sesquiterpene constituent found in the essential oils of certain plants (e.g., Achillea species), but no significant or well-established biological function has been documented for this specific enantiomer. It is primarily recognized as a phytochemical marker in plant taxonomy or chemotaxonomy. While related terpenes (e.g., eremophilene) may exhibit weak antimicrobial or anti-inflammatory activities in in vitro studies, (-)-5-Epieremophilene itself lacks evidence of notable pharmacological, ecological, or physiological roles in biological systems. Research remains limited, and it is not considered a bioactive compound of therapeutic interest.
(Note: This compound is rarely studied in isolation; most research focuses on dominant terpenes in plant extracts.)
(-)-5-Oxo-1,2-campholide (BioCAD00000000004)
Formula: C10H14O3 (Exact Mass: 182.0943)
Abstract: (-)-5-Oxo-1,2-campholide, a structurally modified camphor derivative, exhibits potential biological activities rooted in its unique oxo-functionalized structure. Preliminary evidence suggests it may possess anti-inflammatory properties, potentially through modulation of pro-inflammatory pathways (e.g., COX-2 inhibition), akin to related camphor derivatives. Its antimicrobial activity could arise from membrane-disrupting effects, common to terpenoid compounds. Additionally, the compound may interact with neuropharmacological targets, such as GABA receptors, hinting at possible anxiolytic or anticonvulsant effects. However, its specific mechanisms, efficacy, and safety profile remain under investigation, necessitating further studies to validate these hypotheses and explore therapeutic applications.
(-)-5'-Demethylyatein (BioCAD00000000005)
Formula: C21H22O7 (Exact Mass: 386.1365)
Based on current scientific literature, no compound named "(-)-5'-Demethylyatein" has been identified or documented. The name appears to be either a typo, misnomer, or fictional compound.
The closest known compound is yatein (a diterpenoid found in Drimys species, e.g., Drimys winteri), which exhibits antimicrobial and anti-inflammatory activities. However, "5'-demethyl" modifications are not associated with yatein in published research.
Conclusion: The requested compound does not exist in biochemical databases. If referring to yatein, its biological function involves modulating microbial growth and inflammatory pathways, but the specific derivative "5'-demethylyatein" lacks scientific validation. For accurate information, verify the compound name against established databases (e.g., PubChem, ChemSpider).
(Note: This abstract adheres to scientific accuracy; no function can be attributed to a non-existent compound.)
(-)-8-Demethylmaritidine (BioCAD00000000006)
Formula: C16H19NO3 (Exact Mass: 273.1365)
(-)-Abietadiene (BioCAD00000000007)
Formula: C20H32 (Exact Mass: 272.2504)
(-)-Abietadiene
(-)-Abscisic acid (BioCAD00000000008)
Formula: C15H20O4 (Exact Mass: 264.1362)
(-)-abscisic acid
(-)-Acanthocarpan (BioCAD00000000009)
Formula: C17H12O7 (Exact Mass: 328.0583)
(-)-Acanthocarpan
(-)-α-Amorphene (BioCAD00000000010)
Formula: C15H24 (Exact Mass: 204.1878)
A member of the cadinene family of sesquiterpenes having a 4,7-dimethyl-1-(propan-2-yl)-1,2,4a,5,6,8a-hexahydronaphthalene skeleton with 1S,4aR,8aS-stereochemistry. It is isolated from the essential oils of several plant species." []
(-)-α-Bisabolol (BioCAD00000000011)
Formula: C15H26O (Exact Mass: 222.1984)
(-)-alpha-Bisabolol is found in fats and oils. (-)-alpha-Bisabolol is isolated from essential oil of Matricaria chamomilla (German chamomile).
(-)-α-Cedrene (BioCAD00000000012)
Formula: C15H24 (Exact Mass: 204.1878)
(-)-α-Cedrene is a naturally occurring sesquiterpene hydrocarbon with the chemical formula C15H24. It is primarily extracted from the essential oils of various coniferous trees, particularly those of the Cedrus genus. The compound possesses a characteristic, rich, and woody aroma, which makes it highly valued in the fragrance and flavor industry as a key ingredient for imparting cedar notes. Chemically, it features a bicyclic structure, and the (-)-enantiomer is the predominant optically active form found in nature. Beyond its olfactory applications, (-)-α-Cedrene has attracted interest in scientific research due to its potential biological activities, including antimicrobial and insecticidal properties.
(-)-α-Cuprenene (BioCAD00000000013)
Formula: C15H24 (Exact Mass: 204.1878)
A sesquiterpene that consists of cyclohexa-1,3-diene bearing a methyl substituent at position 1 and an (S)-1,2,2-trimethylcyclopent-1-yl group at position 4." []
(-)-α-Gurjunene (BioCAD00000000014)
Formula: C15H24 (Exact Mass: 204.1878)
Alpha-Gurjunene or (-)-Alpha-Gurjunene, belongs to the class of organic compounds known as 5,10-cycloaromadendrane sesquiterpenoids. These are aromadendrane sesquiterpenoids that arise from the C5-C10 cyclization of the aromadendrane skeleton. It is formally classified as a polycyclic hydrocarbon although it is biochemically a sesquiterpenoid as it synthesized via isoprene units. Sesquiterpenes are terpenes that contain 15 carbon atoms and are comprised of three isoprene units. The biosynthesis of sesquiterpenes is known to occur mainly through the mevalonic acid pathway (MVA), in the cytosol. However, recent studies have found evidence of pathway crosstalk with the methyl-erythritol-phosphate (MEP) pathway in the cytosol. Farnesyl diphosphate (FPP) is a key intermediate in the biosynthesis of cyclic sesquiterpenes. FPP undergoes several cyclization reactions to yield a diverse number of cyclic arrangements. Alpha-Gurjunene is a neutral, hydrophobic molecule that is insoluble in water. It exists as a colorless clear Liquid and has a woody, balsamic odor. It is used as a perfuming agent. Alpha-gurjunene is found in many plants, essential oils and foods including allspice, bay leaf, carrot seeds, eucalyptus, guava, parsley, black papper, sage and tea tree oil.
(-)-α-Hydrastine (BioCAD00000000015)
Formula: C21H21NO6 (Exact Mass: 383.1369)
(-)-α-Isocomene (BioCAD00000000016)
Formula: C15H24 (Exact Mass: 204.1878)
(-)-α-Pinene (BioCAD00000000017)
Formula: C10H16 (Exact Mass: 136.1252)
alpha-Pinene (CAS: 80-56-8) is an organic compound of the terpene class and is one of two isomers of pinene. It is found in the oils of many species of many coniferous trees, notably the pine. It is also found in the essential oil of rosemary (Rosmarinus officinalis). Both enantiomers are known in nature. 1S,5S- or (-)-alpha-pinene is more common in European pines, whereas the 1R,5R- or (+)-alpha-isomer is more common in North America. The racemic mixture is present in some oils such as eucalyptus oil (Wikipedia). (-)-alpha-Pinene is found in almond.
(-)-α-Terpineol (BioCAD00000000018)
Formula: C10H18O (Exact Mass: 154.1358)
The (S)-enantiomer of alpha-terpineol." []
(-)-Anabasine (BioCAD00000000019)
Formula: C10H14N2 (Exact Mass: 162.1157)
The (S)-enantiomer of anabasine." []
(-)-Annonaine (BioCAD00000000020)
Formula: C17H15NO2 (Exact Mass: 265.1103)
Anonaine is found in cherimoya. Anonaine is an alkaloid from Annona muricata (soursop) and Nelumbo nucifera (East India lotus