Pathways Knowlegdes
Biological pathway database
| Pathway | DOIs | Note |
|---|---|---|
| superpathway of central carbon metabolism Accession ID: BioCyc:LEISH_PWY3IU-99 |
|
Sernee MF, Ralton JE, Dinev Z, Khairallah GN, O’Hair RA, Williams SJ, McConville MJ. Leishmania ß-1,2-mannan is assembled on a mannose-cyclic phosphate primer. Proc. Natl. Acad. Sci. U.S.A. 2006 Jun 20;103(25):9458–63. doi: 10.1073/pnas.0603539103. |
| glycolysis I Accession ID: BioCyc:LEISH_GLYCOLYSIS |
|
Michels PAM, Bringaud F, Herman M, Hannaert V. Metabolic functions of glycosomes in trypanosomatids. Biochimica et Biophysica Acta (BBA) - Molecular Cell Research. 2006 Dec;1763(12):1463–77. doi: 10.1016/j.bbamcr.2006.08.019. |
| gluconeogenesis I Accession ID: BioCyc:LEISH_GLUCONEO-PWY |
|
Rodríguez-Contreras D, Landfear SM. Metabolic Changes in Glucose Transporter-deficient Leishmania mexicana and Parasite Virulence. Journal of Biological Chemistry. 2006 Jul;281(29):20068–76. doi: 10.1074/jbc.m603265200.; Naderer T, Ellis MA, Sernee MF, De Souza DP, Curtis J, Handman E, McConville MJ. Virulence of Leishmania major in macrophages and mice requires the gluconeogenic enzyme fructose-1,6-bisphosphatase. Proc. Natl. Acad. Sci. U.S.A. 2006 Apr 04;103(14):5502–7. doi: 10.1073/pnas.0509196103. |
| pyridine nucleotide cycling (plants) Accession ID: BioCyc:LEISH_PWY-5381 |
- | |
| purine nucleotide metabolism (phosphotransfer and nucleotide modification) Accession ID: BioCyc:LEISH_PWY3IU-445 |
- | |
| selenocysteine biosynthesis I (bacteria) Accession ID: BioCyc:LEISH_PWY0-901 |
- | |
| acetate conversion to acetyl-CoA Accession ID: BioCyc:TRYPANO_PWY0-1313 |
- | |
| phenylacetate degradation II (anaerobic) Accession ID: BioCyc:TRYPANO_PWY-1341 |
- | |
| superpathway of glyoxylate cycle Accession ID: BioCyc:TRYPANO_PWY-561 |
- | |
| superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass Accession ID: BioCyc:TRYPANO_GLYCOLYSIS-TCA-GLYOX-BYPASS |
- | |
| purine and pyrimidine metabolism Accession ID: BioCyc:TRYPANO_P1-PWY |
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| aspartate superpathway Accession ID: BioCyc:TRYPANO_PWY0-781 |
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| superpathway of histidine, purine, and pyrimidine biosynthesis Accession ID: BioCyc:TRYPANO_PRPP-PWY |
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| guanosine nucleotides de novo biosynthesis Accession ID: BioCyc:TRYPANO_PWY-6125 |
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| NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde Accession ID: BioCyc:TRYPANO_PWY-5653 |
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| PRPP biosynthesis I Accession ID: BioCyc:TRYPANO_PWY0-662 |
- | |
| selenocysteine biosynthesis Accession ID: BioCyc:CALBI_PWY0-901 |
|
Falcone G, Giambanco V. Synthesis of seleno-amino-acids in cell free extracts of Candida albicans. Nature. 1967 Jan 28;213(5074):396–8. doi: 10.1038/213396a0. PMID: 6029526.; HEDEGAARD J, FALCONE G, CALABRO S. [Incorporation of selenium into analogs of sulfurated amino acids in Candida albicans]. C R Seances Soc Biol Fil. 1963 Jun 10;157():280–4. PMID: 13963671.; FALCONE G, NICKERSON WJ, TABER WA. Physiological bases of morphogenesis in fungi. V. Effect of selenite and tellurite on cellular division of yeastlike fungi. Can J Microbiol. 1956 Oct;2(6):575–84. doi: 10.1139/m56-070. PMID: 13374604. |
| superpathway of histidine, purine and pyrimidine biosynthesis Accession ID: BioCyc:CALBI_PRPP-PWY |
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| tetrahydrofolate biosynthesis Accession ID: BioCyc:CALBI_PWY-3742 |
|
Cossins EA, Chen L. Folates and one-carbon metabolism in plants and fungi. Phytochemistry. 1997 Jun;45(3):437–52. doi: 10.1016/s0031-9422(96)00833-3. PMID: 9190084.; Daly S, Mastromei G, Yacoub A, Lorenzetti R. Sequence of a dihydrofolate reductase-encoding gene from Candida albicans. Gene. 1994 Sep 15;147(1):115–8. doi: 10.1016/0378-1119(94)90049-3. PMID: 7916311. |
| PRPP biosynthesis Accession ID: BioCyc:CALBI_PWY0-662 |
|
Alloush HM, Kerridge D. Characterisation of a partially purified uracil phosphoribosyltransferase from the opportunistic pathogen Candida albicans. Mycopathologia. 1994 Mar;125(3):129–41. doi: 10.1007/bf01146517. PMID: 8047103. |