Butyrivibrio fibrisolvens

ncbi_taxid: 831 - Butyrivibrio fibrisolvens(species); all_childs: 657324, 889972, 1121131, 1280687, 1280696, 1280697, 1280699, 1280700, 1280703

taxonomy name: Butyrivibrio fibrisolvens (species)
chinese name:
ancestor: Butyrivibrio (genus)
ncbi taxonomy: 831
GTDB taxonomy:

Organism Phenotype Traits

Trait Unit Trait Value Ontology Terms
[Environmental preferences/Atmosphere] obligate anaerobic boolean true OMP:0000184
[Environmental preferences/Atmosphere] oxygen preference factor anaerobic MICRO:0000491
[Environmental preferences/pH] pH growth pH 7.29 (7.090517 ~ 7.6447077) OMP:0005008
[Environmental preferences/pH] pH maximum pH 8.97 (8.725734 ~ 9.279958) OMP:0005008
[Environmental preferences/pH] pH minimum pH 5.89 (5.740629 ~ 6.104723) OMP:0005008
[Environmental preferences/Salinity] salinity growth % NaCl (w/v) 3.44 (2.0705218 ~ 4.127659) OMP:0005013
[Environmental preferences/Salinity] salinity maximum % NaCl (w/v) 6.45 (2.7330785 ~ 7.880595) OMP:0005013
[Environmental preferences/Salinity] salinity minimum % NaCl (w/v) 1.21 (0.18600002 ~ 1.6764904) OMP:0005013
[Environmental preferences/Temperature] temperature growth Celsius 37 OMP:0005002
[Environmental preferences/Temperature] temperature maximum Celsius 45.07 (41.835308 ~ 47.685577) OMP:0005002
[Environmental preferences/Temperature] temperature minimum Celsius 21.49 (20.202255 ~ 22.965754) OMP:0005002
[Environmental preferences/Temperature] temperature preference factor mesophilic OMP:0005002
[Enzymes/Enzyme activity] enzyme activity: acid phosphatase (EC3.1.3.2) boolean true SNOMED:424017009, EC3.1.3.2
[Enzymes/Enzyme activity] enzyme activity: alkaline phosphatase (EC3.1.3.1) boolean true SNOMED:424017009, EC3.1.3.1
[Enzymes/Enzyme activity] enzyme activity: alpha-arabinosidase (EC3.2.1.55) boolean true SNOMED:424017009, EC3.2.1.55
[Enzymes/Enzyme activity] enzyme activity: alpha-galactosidase (EC3.2.1.22) boolean true SNOMED:424017009, EC3.2.1.22
[Enzymes/Enzyme activity] enzyme activity: alpha-glucosidase (EC3.2.1.20) boolean true SNOMED:424017009, EC3.2.1.20
[Enzymes/Enzyme activity] enzyme activity: DNase boolean No robust majority SNOMED:424017009
[Genome/Composition] coding density % 86.29 (83.35 ~ 87.88) SIO:001276, mesh:D059646, SNOMED:258755000
[Genome/Composition] GC percentage % 39.58 (38.5 ~ 40.3) mesh:D001482
[Genome/Gene content] estimated gene count genes 3764.38 (2959.2 ~ 4211) OBI:0002568, gene, NCIT:C25498
[Genome/Gene content] gene count genes 3668.75 (1814 ~ 4211) OBI:0002568, gene
[Genome/Genome size] estimated genome size bp 4315931.58 (3157117.5 ~ 5015023) GENEPIO:0001561
[Genome/Genome size] info:genome size bp 4213882 (1935313 ~ 5015023) GENEPIO:0001561
[Metabolism/Catabolic process] degradation: cellulose boolean true GO:0009056, CHEBI:62968
View All Phenotype Traits

Taxonomy Lineage

Child Taxonomy

taxonomy name rank note
Butyrivibrio fibrisolvens 16/4 strain ncbi_taxid: 657324 - Butyrivibrio fibrisolvens 16/4(strain); all_childs:
Butyrivibrio fibrisolvens OB157 strain ncbi_taxid: 889972 - Butyrivibrio fibrisolvens OB157(strain); all_childs:
Butyrivibrio fibrisolvens DSM 3071 strain ncbi_taxid: 1121131 - Butyrivibrio fibrisolvens DSM 3071(strain); all_childs:
Butyrivibrio fibrisolvens YRB2005 strain ncbi_taxid: 1280687 - Butyrivibrio fibrisolvens YRB2005(strain); all_childs:
Butyrivibrio fibrisolvens ND3005 strain ncbi_taxid: 1280696 - Butyrivibrio fibrisolvens ND3005(strain); all_childs:
Butyrivibrio fibrisolvens AB2020 strain ncbi_taxid: 1280697 - Butyrivibrio fibrisolvens AB2020(strain); all_childs:
Butyrivibrio fibrisolvens WTE3004 strain ncbi_taxid: 1280699 - Butyrivibrio fibrisolvens WTE3004(strain); all_childs:
Butyrivibrio fibrisolvens FE2007 strain ncbi_taxid: 1280700 - Butyrivibrio fibrisolvens FE2007(strain); all_childs:
Butyrivibrio fibrisolvens MD2001 strain ncbi_taxid: 1280703 - Butyrivibrio fibrisolvens MD2001(strain); all_childs:

Enzyme Proteins

protein id name ec_number function
P30269 [UniProt] amyA 3.2.1.1 Alpha-amylase
O31060 [UniProt] apt 2.4.2.7 Adenine phosphoribosyltransferase
P16084 [UniProt] bglA 3.2.1.21 Beta-glucosidase A
P45981 [UniProt] galT 2.7.7.12 Galactose-1-phosphate uridylyltransferase
P30539 [UniProt] glgB 2.4.1.18 1,4-alpha-glucan branching enzyme GlgB
Q05650 [UniProt] glnA 6.3.1.2 Glutamine synthetase
P20847 [UniProt] end1 3.2.1.4 Endoglucanase 1
P23658 [UniProt] ced1 3.2.1.4 Cellodextrinase
P22541 [UniProt] celA 3.2.1.4 Endoglucanase A
P45982 [UniProt] xylB 3.2.1.37 Xylosidase/arabinosidase
P45982 [UniProt] xylB 3.2.1.55 Xylosidase/arabinosidase
P23551 [UniProt] xynA 3.2.1.8 Endo-1,4-beta-xylanase A
P26223 [UniProt] xynB 3.2.1.8 Endo-1,4-beta-xylanase B

Metabolites Taxonomy Source

Creating taxonomically-informed metabolome libraries