Asticcacaulis

ncbi_taxid: 76890 - Asticcacaulis(genus); all_childs: 76891, 78587, 260084, 265210, 347481, 1217274, 1395890, 2565365, 2628350, 2984210, 2984211, 2984212

taxonomy name: Asticcacaulis (genus)
chinese name:
ancestor: Caulobacteraceae (family)
ncbi taxonomy: 76890
GTDB taxonomy:

Organism Phenotype Traits

Trait Unit Trait Value Ontology Terms
[Environmental preferences/Atmosphere] aerotolerant boolean true MICRO:0000502
[Environmental preferences/Atmosphere] obligate aerobic boolean true OMP:0000185
[Environmental preferences/Atmosphere] oxygen preference factor aerobic MICRO:0000491
[Environmental preferences/pH] pH growth pH 6.64 (5.747656 ~ 7.3753443) OMP:0005008
[Environmental preferences/pH] pH maximum pH 8.59 (7.6939974 ~ 9.5) OMP:0005008
[Environmental preferences/pH] pH minimum pH 4.94 (4.20881 ~ 5.602525) OMP:0005008
[Environmental preferences/pH] pH preference factor alkaliphile OMP:0005008
[Environmental preferences/Salinity] salinity growth % NaCl (w/v) 0.96 (0.035364915 ~ 2.738442) OMP:0005013
[Environmental preferences/Salinity] salinity maximum % NaCl (w/v) 2.75 (1 ~ 10) OMP:0005013
[Environmental preferences/Salinity] salinity minimum % NaCl (w/v) 0.45 (0 ~ 1.1417481) OMP:0005013
[Environmental preferences/Temperature] temperature growth Celsius 25.33 (17.28547 ~ 30) OMP:0005002
[Environmental preferences/Temperature] temperature maximum Celsius 33.07 (20 ~ 40) OMP:0005002
[Environmental preferences/Temperature] temperature minimum Celsius 9.68 (1.2806928 ~ 25) OMP:0005002
[Environmental preferences/Temperature] temperature preference factor mesophilic OMP:0005002
[Enzymes/Enzyme activity] enzyme activity: acid phosphatase (EC3.1.3.2) boolean No robust majority SNOMED:424017009, EC3.1.3.2
[Enzymes/Enzyme activity] enzyme activity: alkaline phosphatase (EC3.1.3.1) boolean No robust majority SNOMED:424017009, EC3.1.3.1
[Enzymes/Enzyme activity] enzyme activity: alpha-fucosidase (EC3.2.1.51) boolean No robust majority SNOMED:424017009, EC3.2.1.51
[Enzymes/Enzyme activity] enzyme activity: alpha-galactosidase (EC3.2.1.22) boolean No robust majority SNOMED:424017009, EC3.2.1.22
[Enzymes/Enzyme activity] enzyme activity: beta-galactosidase (EC3.2.1.23) boolean No robust majority SNOMED:424017009, EC3.2.1.23
[Enzymes/Enzyme activity] enzyme activity: beta-glucosidase (EC3.2.1.21) boolean true SNOMED:424017009, EC3.2.1.21
[Enzymes/Enzyme activity] enzyme activity: catalase (EC1.11.1.6) boolean true SNOMED:424017009, EC1.11.1.6
[Enzymes/Enzyme activity] enzyme activity: lipase boolean No robust majority SNOMED:424017009
[Enzymes/Enzyme activity] enzyme activity: oxidase boolean true SNOMED:424017009
[Genome/Composition] coding density % 88.77 (86.5 ~ 90.18) SIO:001276, mesh:D059646, SNOMED:258755000
[Genome/Composition] GC percentage % 60.24 (56.5 ~ 63.8) mesh:D001482
View All Phenotype Traits

Taxonomy Lineage

Child Taxonomy

taxonomy name rank note
Asticcacaulis biprosthecium species ncbi_taxid: 76891 - Asticcacaulis biprosthecium(species); all_childs: 715226
Asticcacaulis excentricus species ncbi_taxid: 78587 - Asticcacaulis excentricus(species); all_childs: 573065
Asticcacaulis taihuensis species ncbi_taxid: 260084 - Asticcacaulis taihuensis(species); all_childs:
environmental samples no rank ncbi_taxid: 265210 - environmental samples(no rank); all_childs: 265211, 654667
Asticcacaulis benevestitus species ncbi_taxid: 347481 - Asticcacaulis benevestitus(species); all_childs: 1121022
Asticcacaulis solisilvae species ncbi_taxid: 1217274 - Asticcacaulis solisilvae(species); all_childs:
Asticcacaulis endophyticus species ncbi_taxid: 1395890 - Asticcacaulis endophyticus(species); all_childs:
Asticcacaulis tiandongensis species ncbi_taxid: 2565365 - Asticcacaulis tiandongensis(species); all_childs:
unclassified Asticcacaulis no rank ncbi_taxid: 2628350 - unclassified Asticcacaulis(no rank); all_childs: 207961, 210686, 419180, 419184, 434839, 474975, 501877, 753099, 943367, 943368, 943369, 943370, 943371, 943372, 943373, 943374, 943375, 943376, 943377, 943378, 943379, 1030213, 1163902, 1190354, 1271772, 1282360, 1282361, 1282362, 1282363, 1359835, 1360610, 1361736, 1361737, 1361738, 1362746, 1362747, 1362748, 1362749, 1362750, 1362751, 1362752, 1362753, 1391274, 1546625, 1607451, 1607591, 1635416, 1635522, 1635559, 1635566, 1636063, 1735578, 1766855, 1872648, 1946063, 1970317, 2135738, 2663826, 2817848, 2840468, 2995155, 3028787, 3040349, 3059027, 3082866, 3082867, 3095608, 3157666, 3232458, 3232471, 3232613, 3342300, 3380860, 3380861, 3380862, 3380863, 3380864, 3380865, 3388666
Asticcacaulis currens species ncbi_taxid: 2984210 - Asticcacaulis currens(species); all_childs:

Enzyme Proteins

protein id name ec_number function

Metabolites Taxonomy Source

Creating taxonomically-informed metabolome libraries