Citrobacter sedlakii

ncbi_taxid: 67826 - Citrobacter sedlakii(species); all_childs: 1218086

taxonomy name: Citrobacter sedlakii (species)
chinese name:
ancestor: Citrobacter freundii complex (species group)
ncbi taxonomy: 67826
GTDB taxonomy: 350790995

Organism Phenotype Traits

Trait Unit Trait Value Ontology Terms
[Environmental preferences/Atmosphere] aerotolerant boolean true MICRO:0000502
[Environmental preferences/Atmosphere] facultative anaerobe boolean true OMP:0000087
[Environmental preferences/Atmosphere] oxygen preference factor facultative anaerobic MICRO:0000491
[Environmental preferences/pH] pH growth pH 7.27 (7.1750665 ~ 7.3548036) OMP:0005008
[Environmental preferences/pH] pH maximum pH 9.76 (9.617242 ~ 9.8762865) OMP:0005008
[Environmental preferences/pH] pH minimum pH 5.31 (5.257668 ~ 5.3754067) OMP:0005008
[Environmental preferences/Salinity] salinity growth % NaCl (w/v) 2.11 (1.924032 ~ 2.4865236) OMP:0005013
[Environmental preferences/Salinity] salinity maximum % NaCl (w/v) 7.06 (6.533634 ~ 7.518063) OMP:0005013
[Environmental preferences/Salinity] salinity minimum % NaCl (w/v) OMP:0005013
[Environmental preferences/Temperature] temperature growth Celsius 32.63 (30 ~ 37) OMP:0005002
[Environmental preferences/Temperature] temperature maximum Celsius 41 OMP:0005002
[Environmental preferences/Temperature] temperature minimum Celsius 10 (5 ~ 30) OMP:0005002
[Environmental preferences/Temperature] temperature preference factor mesophilic OMP:0005002
[Enzymes/Enzyme activity] enzyme activity: acid phosphatase (EC3.1.3.2) boolean true SNOMED:424017009, EC3.1.3.2
[Enzymes/Enzyme activity] enzyme activity: alanine arylamidase (EC3.4.11.2) boolean true SNOMED:424017009, EC3.4.11.2
[Enzymes/Enzyme activity] enzyme activity: alkaline phosphatase (EC3.1.3.1) boolean true SNOMED:424017009, EC3.1.3.1
[Enzymes/Enzyme activity] enzyme activity: alpha-galactosidase (EC3.2.1.22) boolean No robust majority SNOMED:424017009, EC3.2.1.22
[Enzymes/Enzyme activity] enzyme activity: alpha-glucosidase (EC3.2.1.20) boolean No robust majority SNOMED:424017009, EC3.2.1.20
[Enzymes/Enzyme activity] enzyme activity: arginine dihydrolase (EC3.5.3.6) boolean No robust majority SNOMED:424017009, EC3.5.3.6
[Enzymes/Enzyme activity] enzyme activity: beta-galactosidase (EC3.2.1.23) boolean true SNOMED:424017009, EC3.2.1.23
[Enzymes/Enzyme activity] enzyme activity: beta-glucosidase (EC3.2.1.21) boolean No robust majority SNOMED:424017009, EC3.2.1.21
[Enzymes/Enzyme activity] enzyme activity: catalase (EC1.11.1.6) boolean true SNOMED:424017009, EC1.11.1.6
[Enzymes/Enzyme activity] enzyme activity: ornithine decarboxylase (EC4.1.1.17) boolean true SNOMED:424017009, EC4.1.1.17
[Enzymes/Enzyme activity] enzyme activity: pyrrolidonyl arylamidase (EC3.4.19.3) boolean true SNOMED:424017009, EC3.4.19.3
[Genome/Composition] coding density % 89.13 (88.47 ~ 89.47) SIO:001276, mesh:D059646, SNOMED:258755000
View All Phenotype Traits

Taxonomy Lineage

Child Taxonomy

taxonomy name rank note
Citrobacter sedlakii NBRC 105722 strain ncbi_taxid: 1218086 - Citrobacter sedlakii NBRC 105722(strain); all_childs:

Enzyme Proteins

protein id name ec_number function

Metabolites Taxonomy Source

Creating taxonomically-informed metabolome libraries