Pantoea dispersa

ncbi_taxid: 59814 - Pantoea dispersa(species); all_childs: 1358411, 1440057

taxonomy name: Pantoea dispersa (species)
chinese name:
ancestor: Pantoea (genus)
ncbi taxonomy: 59814
GTDB taxonomy: 1484665848

Organism Phenotype Traits

Trait Unit Trait Value Ontology Terms
[Environmental preferences/Atmosphere] aerotolerant boolean true MICRO:0000502
[Environmental preferences/Atmosphere] facultative anaerobe boolean true OMP:0000087
[Environmental preferences/Atmosphere] obligate aerobic boolean No robust majority OMP:0000185
[Environmental preferences/Atmosphere] oxygen preference factor aerobic MICRO:0000491
[Environmental preferences/pH] pH growth pH 6.97 (6.843305 ~ 7.2233396) OMP:0005008
[Environmental preferences/pH] pH maximum pH 9.35 (9.186001 ~ 9.644283) OMP:0005008
[Environmental preferences/pH] pH minimum pH 4.73 (4.618724 ~ 4.952047) OMP:0005008
[Environmental preferences/Salinity] salinity growth % NaCl (w/v) 2.54 (2.221539 ~ 3.110581) OMP:0005013
[Environmental preferences/Salinity] salinity maximum % NaCl (w/v) 7.71 (6.8039603 ~ 8.415513) OMP:0005013
[Environmental preferences/Salinity] salinity minimum % NaCl (w/v) 0.18 (0 ~ 0.51649594) OMP:0005013
[Environmental preferences/Temperature] temperature growth Celsius 31.25 (28 ~ 37) OMP:0005002
[Environmental preferences/Temperature] temperature maximum Celsius 36.33 (35 ~ 37) OMP:0005002
[Environmental preferences/Temperature] temperature minimum Celsius 21.33 (10 ~ 30) OMP:0005002
[Environmental preferences/Temperature] temperature preference factor mesophilic OMP:0005002
[Enzymes/Enzyme activity] enzyme activity: acid phosphatase (EC3.1.3.2) boolean true SNOMED:424017009, EC3.1.3.2
[Enzymes/Enzyme activity] enzyme activity: alkaline phosphatase (EC3.1.3.1) boolean true SNOMED:424017009, EC3.1.3.1
[Enzymes/Enzyme activity] enzyme activity: beta-galactosidase (EC3.2.1.23) boolean No robust majority SNOMED:424017009, EC3.2.1.23
[Enzymes/Enzyme activity] enzyme activity: catalase (EC1.11.1.6) boolean true SNOMED:424017009, EC1.11.1.6
[Enzymes/Enzyme activity] enzyme activity: ornithine decarboxylase (EC4.1.1.17) boolean true SNOMED:424017009, EC4.1.1.17
[Enzymes/Enzyme activity] enzyme activity: pyrrolidonyl arylamidase (EC3.4.19.3) boolean true SNOMED:424017009, EC3.4.19.3
[Genome/Composition] coding density % 87.74 (82.07 ~ 89.14) SIO:001276, mesh:D059646, SNOMED:258755000
[Genome/Composition] GC percentage % 57.8 (57.4 ~ 58.5) mesh:D001482
[Genome/Gene content] estimated gene count genes 4491.02 (3715 ~ 5871.1) OBI:0002568, gene, NCIT:C25498
[Genome/Gene content] gene count genes 4131.32 (2481 ~ 4850) OBI:0002568, gene
[Genome/Genome size] estimated genome size bp 4821728.59 (4325234 ~ 5367782) GENEPIO:0001561
View All Phenotype Traits

Taxonomy Lineage

Child Taxonomy

taxonomy name rank note
Pantoea dispersa EGD-AAK13 strain ncbi_taxid: 1358411 - Pantoea dispersa EGD-AAK13(strain); all_childs:
Pantoea dispersa 625 strain ncbi_taxid: 1440057 - Pantoea dispersa 625(strain); all_childs:

Enzyme Proteins

protein id name ec_number function

Metabolites Taxonomy Source

Creating taxonomically-informed metabolome libraries