Citrobacter braakii

ncbi_taxid: 57706 - Citrobacter braakii(species); all_childs:

taxonomy name: Citrobacter braakii (species)
chinese name:
ancestor: Citrobacter freundii complex (species group)
ncbi taxonomy: 57706
GTDB taxonomy: 210427880

Organism Phenotype Traits

Trait Unit Trait Value Ontology Terms
[Environmental preferences/Atmosphere] aerotolerant boolean true MICRO:0000502
[Environmental preferences/Atmosphere] facultative anaerobe boolean true OMP:0000087
[Environmental preferences/Atmosphere] oxygen preference factor facultative anaerobic MICRO:0000491
[Environmental preferences/pH] pH growth pH 7.2 (6.977839 ~ 7.49154) OMP:0005008
[Environmental preferences/pH] pH maximum pH 9.61 (9.30413 ~ 9.956748) OMP:0005008
[Environmental preferences/pH] pH minimum pH 5.16 (5.0075803 ~ 5.272963) OMP:0005008
[Environmental preferences/Salinity] salinity growth % NaCl (w/v) 2.17 (1.2395873 ~ 2.8150673) OMP:0005013
[Environmental preferences/Salinity] salinity maximum % NaCl (w/v) 7.23 (5.637981 ~ 8.837395) OMP:0005013
[Environmental preferences/Salinity] salinity minimum % NaCl (w/v) 0 (0 ~ 0.016920531) OMP:0005013
[Environmental preferences/Temperature] temperature growth Celsius 31 (30 ~ 37) OMP:0005002
[Environmental preferences/Temperature] temperature maximum Celsius 41 OMP:0005002
[Environmental preferences/Temperature] temperature minimum Celsius 11 (5 ~ 30) OMP:0005002
[Enzymes/Enzyme activity] enzyme activity: acid phosphatase (EC3.1.3.2) boolean true SNOMED:424017009, EC3.1.3.2
[Enzymes/Enzyme activity] enzyme activity: alkaline phosphatase (EC3.1.3.1) boolean true SNOMED:424017009, EC3.1.3.1
[Enzymes/Enzyme activity] enzyme activity: alpha-galactosidase (EC3.2.1.22) boolean No robust majority SNOMED:424017009, EC3.2.1.22
[Enzymes/Enzyme activity] enzyme activity: alpha-glucosidase (EC3.2.1.20) boolean No robust majority SNOMED:424017009, EC3.2.1.20
[Enzymes/Enzyme activity] enzyme activity: arginine dihydrolase (EC3.5.3.6) boolean No robust majority SNOMED:424017009, EC3.5.3.6
[Enzymes/Enzyme activity] enzyme activity: beta-galactosidase (EC3.2.1.23) boolean true SNOMED:424017009, EC3.2.1.23
[Enzymes/Enzyme activity] enzyme activity: beta-glucosidase (EC3.2.1.21) boolean No robust majority SNOMED:424017009, EC3.2.1.21
[Enzymes/Enzyme activity] enzyme activity: catalase (EC1.11.1.6) boolean true SNOMED:424017009, EC1.11.1.6
[Enzymes/Enzyme activity] enzyme activity: L-aspartate arylamidase (EC3.4.11.21) boolean No robust majority SNOMED:424017009, EC3.4.11.21
[Enzymes/Enzyme activity] enzyme activity: ornithine decarboxylase (EC4.1.1.17) boolean true SNOMED:424017009, EC4.1.1.17
[Enzymes/Enzyme activity] enzyme activity: pyrrolidonyl arylamidase (EC3.4.19.3) boolean true SNOMED:424017009, EC3.4.19.3
[Genome/Composition] coding density % 87.39 (66.21 ~ 92.87) SIO:001276, mesh:D059646, SNOMED:258755000
[Genome/Composition] GC percentage % 52.2 (51.5 ~ 54) mesh:D001482
View All Phenotype Traits

Taxonomy Lineage

Child Taxonomy

taxonomy name rank note

Enzyme Proteins

protein id name ec_number function
Q8VQF6 [UniProt] cinA 1.14.14.133 1,8-cineole 2-endo-monooxygenase
Q8VQF5 [UniProt] cinB 1.18.1.- Cindoxin reductase

Metabolites Taxonomy Source

Creating taxonomically-informed metabolome libraries