Neisseria flavescens

ncbi_taxid: 484 - Neisseria flavescens(species); all_childs: 546264, 596320

taxonomy name: Neisseria flavescens (species)
chinese name:
ancestor: Neisseria (genus)
ncbi taxonomy: 484
GTDB taxonomy:

Organism Phenotype Traits

Trait Unit Trait Value Ontology Terms
[Environmental preferences/Atmosphere] aerotolerant boolean true MICRO:0000502
[Environmental preferences/Atmosphere] capnophilic boolean true SNOMED:413748004
[Environmental preferences/Atmosphere] facultative anaerobe boolean No robust majority OMP:0000087
[Environmental preferences/Atmosphere] obligate aerobic boolean No robust majority OMP:0000185
[Environmental preferences/Atmosphere] oxygen preference factor aerobic MICRO:0000491
[Environmental preferences/pH] pH growth pH 7.01 (6.457303 ~ 7.2654023) OMP:0005008
[Environmental preferences/pH] pH maximum pH 9.1 (8.390087 ~ 9.448438) OMP:0005008
[Environmental preferences/pH] pH minimum pH 5.19 (4.904981 ~ 5.44559) OMP:0005008
[Environmental preferences/Salinity] salinity growth % NaCl (w/v) 2.54 (1.3204917 ~ 3.5095239) OMP:0005013
[Environmental preferences/Salinity] salinity maximum % NaCl (w/v) 5.98 (4.1593795 ~ 8.132751) OMP:0005013
[Environmental preferences/Salinity] salinity minimum % NaCl (w/v) 0.32 (0 ~ 1.004475) OMP:0005013
[Environmental preferences/Temperature] temperature growth Celsius 37 OMP:0005002
[Environmental preferences/Temperature] temperature maximum Celsius 42 OMP:0005002
[Environmental preferences/Temperature] temperature minimum Celsius 33 OMP:0005002
[Environmental preferences/Temperature] temperature preference factor mesophilic OMP:0005002
[Enzymes/Enzyme activity] enzyme activity: catalase (EC1.11.1.6) boolean true SNOMED:424017009, EC1.11.1.6
[Enzymes/Enzyme activity] enzyme activity: oxidase boolean true SNOMED:424017009
[Enzymes/Enzyme activity] enzyme activity: proline-arylamidase (EC3.4.11.5) boolean true SNOMED:424017009, EC3.4.11.5
[Genome/Composition] coding density % 87.2 (85.96 ~ 88.15) SIO:001276, mesh:D059646, SNOMED:258755000
[Genome/Composition] GC percentage % 49.24 (48.3 ~ 50.1) mesh:D001482
[Genome/Gene content] estimated gene count genes 2196.46 (1852.9 ~ 2939) OBI:0002568, gene, NCIT:C25498
[Genome/Gene content] gene count genes 1893.66 (1082 ~ 2421) OBI:0002568, gene
[Genome/Genome size] estimated genome size bp 2225173.73 (1722484.2 ~ 2687069.8) GENEPIO:0001561
[Genome/Genome size] info:genome size bp 1924475.74 (1079331 ~ 2493104) GENEPIO:0001561
[Genome/Pangenome] pangenome openness score 0.54 None
View All Phenotype Traits

Taxonomy Lineage

Child Taxonomy

taxonomy name rank note
Neisseria flavescens NRL30031/H210 strain ncbi_taxid: 546264 - Neisseria flavescens NRL30031/H210(strain); all_childs:
Neisseria flavescens SK114 strain ncbi_taxid: 596320 - Neisseria flavescens SK114(strain); all_childs:

Enzyme Proteins

protein id name ec_number function
P95340 [UniProt] aroE 1.1.1.25 Shikimate dehydrogenase (NADP(+))
P48215 [UniProt] groEL 5.6.1.7 Chaperonin GroEL
Q59596 [UniProt] adk 2.7.4.3 Adenylate kinase
Q01323 [UniProt] argF 2.1.3.3 Ornithine carbamoyltransferase
O87626 [UniProt] mrcA 2.4.99.28 Penicillin-binding protein 1A
O87626 [UniProt] mrcA 3.4.16.4 Penicillin-binding protein 1A
P16873 [UniProt] penA 3.4.16.4 Probable peptidoglycan D,D-transpeptidase PenA

Metabolites Taxonomy Source

Creating taxonomically-informed metabolome libraries