Erwinia typographi

ncbi_taxid: 371042 - Erwinia typographi(species); all_childs:

taxonomy name: Erwinia typographi (species)
chinese name:
ancestor: Erwinia (genus)
ncbi taxonomy: 371042
GTDB taxonomy: 288126443

Organism Phenotype Traits

Trait Unit Trait Value Ontology Terms
[Environmental preferences/Atmosphere] aerotolerant boolean true MICRO:0000502
[Environmental preferences/Atmosphere] facultative anaerobe boolean true OMP:0000087
[Environmental preferences/Atmosphere] oxygen preference factor facultative anaerobic MICRO:0000491
[Environmental preferences/pH] pH growth pH 7 OMP:0005008
[Environmental preferences/pH] pH maximum pH 9.39 OMP:0005008
[Environmental preferences/pH] pH minimum pH 4.88 OMP:0005008
[Environmental preferences/Salinity] salinity growth % NaCl (w/v) 1.65 OMP:0005013
[Environmental preferences/Salinity] salinity maximum % NaCl (w/v) 6.08 OMP:0005013
[Environmental preferences/Salinity] salinity minimum % NaCl (w/v) OMP:0005013
[Environmental preferences/Temperature] temperature growth Celsius 28 OMP:0005002
[Environmental preferences/Temperature] temperature maximum Celsius 30.67 (28 ~ 36) OMP:0005002
[Environmental preferences/Temperature] temperature minimum Celsius 24 (22 ~ 25) OMP:0005002
[Enzymes/Enzyme activity] enzyme activity: alkaline phosphatase (EC3.1.3.1) boolean true SNOMED:424017009, EC3.1.3.1
[Enzymes/Enzyme activity] enzyme activity: catalase (EC1.11.1.6) boolean true SNOMED:424017009, EC1.11.1.6
[Enzymes/Enzyme activity] enzyme activity: lysine decarboxylase (EC4.1.1.18) boolean true SNOMED:424017009, EC4.1.1.18
[Enzymes/Enzyme activity] enzyme activity: pyrrolidonyl arylamidase (EC3.4.19.3) boolean true SNOMED:424017009, EC3.4.19.3
[Genome/Composition] coding density % 87.9 SIO:001276, mesh:D059646, SNOMED:258755000
[Genome/Composition] GC percentage % 55 mesh:D001482
[Genome/Gene content] estimated gene count genes 5524 OBI:0002568, gene, NCIT:C25498
[Genome/Gene content] gene count genes 5524 OBI:0002568, gene
[Genome/Genome size] estimated genome size bp 5749517 GENEPIO:0001561
[Genome/Genome size] info:genome size bp 5749517 GENEPIO:0001561
[Metabolism/Carbon utilization] carbon source: arabinose boolean true GO:0015976, CHEBI:22599
[Metabolism/Carbon utilization] carbon source: fructose boolean true GO:0015976, CHEBI:28757
[Metabolism/Carbon utilization] carbon source: galactose boolean true GO:0015976, CHEBI:28260
View All Phenotype Traits

Taxonomy Lineage

Child Taxonomy

taxonomy name rank note

Enzyme Proteins

protein id name ec_number function

Metabolites Taxonomy Source

Creating taxonomically-informed metabolome libraries