Arabidopsis thaliana
ncbi_taxid: 3702 - Arabidopsis thaliana(species); all_childs:
taxonomy name: Arabidopsis thaliana (species)
chinese name:
ancestor: Arabidopsis (genus)
ncbi taxonomy: 3702
GTDB taxonomy:
Organism Phenotype Traits
| Trait | Unit | Trait Value | Ontology Terms |
|---|
Taxonomy Lineage
Child Taxonomy
| taxonomy name | rank | note |
|---|
Enzyme Proteins
| protein id | name | ec_number | function |
|---|---|---|---|
| B5BT18 [UniProt] | BTAF1 | 3.6.4.- | TATA-binding protein-associated factor BTAF1 |
| B6SFA4 [UniProt] | MAA3 | 3.6.4.- | Probable helicase MAGATAMA 3 |
| B9DFG3 [UniProt] | ISE2 | 3.6.4.13 | DExH-box ATP-dependent RNA helicase DExH15 chloroplastic |
| D8WUA4 [UniProt] | SECA2 | 7.4.2.4 | Protein translocase subunit SECA2, chloroplastic |
| F4HW51 [UniProt] | ATRX | 3.6.4.- | Protein CHROMATIN REMODELING 20 |
| F4IDQ6 [UniProt] | NIH | 3.6.4.12 | DExH-box ATP-dependent RNA helicase DExH2 |
| F4IDQ6 [UniProt] | NIH | 3.6.4.13 | DExH-box ATP-dependent RNA helicase DExH2 |
| F4IE66 [UniProt] | RID1 | 3.6.4.13 | Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 |
| F4IHS2 [UniProt] | SYD | 3.6.4.- | Chromatin structure-remodeling complex protein SYD |
| F4INA9 [UniProt] | RECG1 | 5.6.2.4 | ATP-dependent DNA helicase homolog RECG1, chloroplastic/mitochondrial |
| F4J9M5 [UniProt] | CHR12 | 3.6.4.12 | Probable ATP-dependent DNA helicase CHR12 |
| F4JAA5 [UniProt] | SKI2 | 3.6.4.13 | DExH-box ATP-dependent RNA helicase DExH11 |
| F4K128 [UniProt] | CHR23 | 3.6.4.12 | Probable ATP-dependent DNA helicase CHR23 |
| F4K2E9 [UniProt] | CUV | 3.6.4.13 | Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7 |
| F4KBP5 [UniProt] | CHR4 | 3.6.4.- | Protein CHROMATIN REMODELING 4 |
| O22755 [UniProt] | ATL44 | 2.3.2.27 | Probable E3 ubiquitin-protein ligase ATL44 |
| O64763 [UniProt] | ATL9 | 2.3.2.27 | E3 ubiquitin-protein ligase ATL9 |
| O65351 [UniProt] | SBT1.7 | 3.4.21.- | Subtilisin-like protease SBT1.7 |
| P41376 [UniProt] | EIF4A1 | 3.6.4.13 | Eukaryotic initiation factor 4A-1 |
| P41377 [UniProt] | TIF4A-2 | 3.6.4.13 | Eukaryotic initiation factor 4A-2 |
| P84634 [UniProt] | DCL4 | 3.1.26.- | Dicer-like protein 4 |
| Q0PCS3 [UniProt] | CHR25 | 3.6.4.- | Protein CHROMATIN REMODELING 25 |
| Q38861 [UniProt] | XPB1 | 5.6.2.4 | General transcription and DNA repair factor IIH helicase/translocase subunit XPB1 |
| Q3EBC8 [UniProt] | DCL2_ARATH | 3.1.26.- | Endoribonuclease Dicer homolog 2 |
| Q56XG6 [UniProt] | RH15 | 3.6.4.13 | DEAD-box ATP-dependent RNA helicase 15 |
| Q588V7 [UniProt] | TEB | 3.6.4.- | Helicase and polymerase-containing protein TEBICHI |
| Q5D892 [UniProt] | MER3 | 5.6.2.4 | ATP-dependent DNA helicase homolog MER3 |
| Q6EVK6 [UniProt] | BRM | 3.6.4.- | Chromatin remodeling ATPase BRAHMA |
| Q7X9V2 [UniProt] | PIE1 | 3.6.4.12 | Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 |
| Q8GYD9 [UniProt] | SDE3 | 3.6.4.13 | Probable RNA helicase SDE3 |
| Q8H0U8 [UniProt] | RH42 | 3.6.4.13 | DEAD-box ATP-dependent RNA helicase 42 |
| Q8H136 [UniProt] | RH14 | 3.6.4.13 | DEAD-box ATP-dependent RNA helicase 14 |
| Q8L7S8 [UniProt] | RH3 | 3.6.4.13 | DEAD-box ATP-dependent RNA helicase 3, chloroplastic |
| Q8L840 [UniProt] | RECQL4A | 5.6.2.4 | ATP-dependent DNA helicase Q-like 4A |
| Q8LGA5 [UniProt] | ATL31 | 2.3.2.27 | E3 ubiquitin-protein ligase ATL31 |
Metabolites Taxonomy Source
Creating taxonomically-informed metabolome libraries