Burkholderia glumae

ncbi_taxid: 337 - Burkholderia glumae(species); all_childs: 626418, 1176492, 1176514, 1248414, 1417989

taxonomy name: Burkholderia glumae (species)
chinese name:
ancestor: Burkholderia (genus)
ncbi taxonomy: 337
GTDB taxonomy: 561303346

Organism Phenotype Traits

Trait Unit Trait Value Ontology Terms
[Environmental preferences/Atmosphere] aerotolerant boolean true MICRO:0000502
[Environmental preferences/Atmosphere] obligate aerobic boolean true OMP:0000185
[Environmental preferences/Atmosphere] oxygen preference factor aerobic MICRO:0000491
[Environmental preferences/pH] pH growth pH 5.89 (5.8073564 ~ 6.0509896) OMP:0005008
[Environmental preferences/pH] pH maximum pH 8.05 (7.94814 ~ 8.227397) OMP:0005008
[Environmental preferences/pH] pH minimum pH 3.99 (3.8368754 ~ 4.139038) OMP:0005008
[Environmental preferences/Salinity] salinity growth % NaCl (w/v) 0.22 (0 ~ 1.2779195) OMP:0005013
[Environmental preferences/Salinity] salinity maximum % NaCl (w/v) 4 OMP:0005013
[Environmental preferences/Salinity] salinity minimum % NaCl (w/v) OMP:0005013
[Environmental preferences/Temperature] temperature growth Celsius 29.33 (28 ~ 30) OMP:0005002
[Environmental preferences/Temperature] temperature maximum Celsius 41 OMP:0005002
[Environmental preferences/Temperature] temperature minimum Celsius 17.5 (10 ~ 25) OMP:0005002
[Environmental preferences/Temperature] temperature preference factor mesophilic OMP:0005002
[Enzymes/Enzyme activity] enzyme activity: acid phosphatase (EC3.1.3.2) boolean true SNOMED:424017009, EC3.1.3.2
[Enzymes/Enzyme activity] enzyme activity: alkaline phosphatase (EC3.1.3.1) boolean true SNOMED:424017009, EC3.1.3.1
[Enzymes/Enzyme activity] enzyme activity: beta-galactosidase (EC3.2.1.23) boolean true SNOMED:424017009, EC3.2.1.23
[Enzymes/Enzyme activity] enzyme activity: catalase (EC1.11.1.6) boolean true SNOMED:424017009, EC1.11.1.6
[Enzymes/Enzyme activity] enzyme activity: lipase boolean true SNOMED:424017009
[Enzymes/Enzyme activity] enzyme activity: lysine decarboxylase (EC4.1.1.18) boolean true SNOMED:424017009, EC4.1.1.18
[Enzymes/Enzyme activity] enzyme activity: oxidase boolean true SNOMED:424017009
[Enzymes/Enzyme activity] enzyme activity: pyrrolidonyl arylamidase (EC3.4.19.3) boolean true SNOMED:424017009, EC3.4.19.3
[Genome/Composition] coding density % 84.54 (83.71 ~ 84.89) SIO:001276, mesh:D059646, SNOMED:258755000
[Genome/Composition] GC percentage % 68.23 (67.7 ~ 68.8) mesh:D001482
[Genome/Gene content] estimated gene count genes 5934.66 (5226 ~ 7143.9) OBI:0002568, gene, NCIT:C25498
[Genome/Gene content] gene count genes 5933 (5226 ~ 7141) OBI:0002568, gene
View All Phenotype Traits

Taxonomy Lineage

Child Taxonomy

taxonomy name rank note
Burkholderia glumae BGR1 strain ncbi_taxid: 626418 - Burkholderia glumae BGR1(strain); all_childs:
Burkholderia glumae LMG 2196 = ATCC 33617 strain ncbi_taxid: 1176492 - Burkholderia glumae LMG 2196 = ATCC 33617(strain); all_childs:
Burkholderia glumae AU6208 strain ncbi_taxid: 1176514 - Burkholderia glumae AU6208(strain); all_childs:
Burkholderia glumae 3252-8 strain ncbi_taxid: 1248414 - Burkholderia glumae 3252-8(strain); all_childs:
Burkholderia glumae 336gr-1 strain ncbi_taxid: 1417989 - Burkholderia glumae 336gr-1(strain); all_childs:

Enzyme Proteins

protein id name ec_number function
A0A1B2U704 [UniProt] A0A1B2U704_BURGL 5.6.2.2 DNA topoisomerase (ATP-hydrolyzing)

Metabolites Taxonomy Source

Creating taxonomically-informed metabolome libraries