Borborobacter

ncbi_taxid: 3143706 - Borborobacter(genus); all_childs: 1851146

taxonomy name: Borborobacter (genus)
chinese name:
ancestor: Phyllobacteriaceae (family)
ncbi taxonomy: 3143706
GTDB taxonomy:

Organism Phenotype Traits

Trait Unit Trait Value Ontology Terms
[Environmental preferences/Atmosphere] aerotolerant boolean true MICRO:0000502
[Environmental preferences/Atmosphere] capnophilic boolean true SNOMED:413748004
[Environmental preferences/Atmosphere] obligate aerobic boolean true OMP:0000185
[Environmental preferences/pH] pH growth pH 7.43 OMP:0005008
[Environmental preferences/pH] pH maximum pH 9.4 OMP:0005008
[Environmental preferences/pH] pH minimum pH 5.39 OMP:0005008
[Environmental preferences/Salinity] salinity growth % NaCl (w/v) 2.71 OMP:0005013
[Environmental preferences/Salinity] salinity maximum % NaCl (w/v) 6.57 OMP:0005013
[Environmental preferences/Salinity] salinity minimum % NaCl (w/v) 0.39 OMP:0005013
[Environmental preferences/Temperature] temperature growth Celsius 31.3 OMP:0005002
[Environmental preferences/Temperature] temperature maximum Celsius 40.54 OMP:0005002
[Environmental preferences/Temperature] temperature minimum Celsius 14.82 OMP:0005002
[Enzymes/Enzyme activity] enzyme activity: alkaline phosphatase (EC3.1.3.1) boolean true SNOMED:424017009, EC3.1.3.1
[Enzymes/Enzyme activity] enzyme activity: arginine dihydrolase (EC3.5.3.6) boolean true SNOMED:424017009, EC3.5.3.6
[Enzymes/Enzyme activity] enzyme activity: catalase (EC1.11.1.6) boolean true SNOMED:424017009, EC1.11.1.6
[Enzymes/Enzyme activity] enzyme activity: coagulase boolean true SNOMED:424017009
[Enzymes/Enzyme activity] enzyme activity: lipase boolean true SNOMED:424017009
[Enzymes/Enzyme activity] enzyme activity: oxidase boolean true SNOMED:424017009
[Genome/Composition] coding density % 84.95 SIO:001276, mesh:D059646, SNOMED:258755000
[Genome/Composition] GC percentage % 61.4 mesh:D001482
[Genome/Gene content] estimated gene count genes 5261.9 OBI:0002568, gene, NCIT:C25498
[Genome/Gene content] gene count genes 5183 OBI:0002568, gene
[Genome/Genome size] estimated genome size bp 5531801 GENEPIO:0001561
[Genome/Genome size] info:genome size bp 5448824 GENEPIO:0001561
[Metabolism/Aerobic growth] aerobic growth: chemoheterotrophy boolean true GO:0040007, PATO:0001455, ECOCORE:00000132
View All Phenotype Traits

Taxonomy Lineage

Child Taxonomy

taxonomy name rank note
Borborobacter arsenicus species ncbi_taxid: 1851146 - Borborobacter arsenicus(species); all_childs:

Enzyme Proteins

protein id name ec_number function

Metabolites Taxonomy Source

Creating taxonomically-informed metabolome libraries