Atribacter

ncbi_taxid: 2847777 - Atribacter(genus); all_childs: 1852833, 2847778, 2847779, 3378220, 3378221, 3378222

taxonomy name: Atribacter (genus)
chinese name:
ancestor: Atribacteraceae (family)
ncbi taxonomy: 2847777
GTDB taxonomy:

Organism Phenotype Traits

Trait Unit Trait Value Ontology Terms
[Environmental preferences/Atmosphere] obligate anaerobic boolean true OMP:0000184
[Environmental preferences/pH] pH growth pH 8.17 (7.6225977 ~ 8.509402) OMP:0005008
[Environmental preferences/pH] pH maximum pH 9.94 (9.30206 ~ 10.412622) OMP:0005008
[Environmental preferences/pH] pH minimum pH 6.01 (5.639762 ~ 6.196617) OMP:0005008
[Environmental preferences/Salinity] salinity growth % NaCl (w/v) 0 (0 ~ 0.04662674) OMP:0005013
[Environmental preferences/Salinity] salinity maximum % NaCl (w/v) 1.99 (0.51169425 ~ 3.5937505) OMP:0005013
[Environmental preferences/Salinity] salinity minimum % NaCl (w/v) OMP:0005013
[Environmental preferences/Temperature] temperature growth Celsius 52.24 (45 ~ 56.468025) OMP:0005002
[Environmental preferences/Temperature] temperature maximum Celsius 60.63 (58.373173 ~ 64.65323) OMP:0005002
[Environmental preferences/Temperature] temperature minimum Celsius 30.42 (27.221846 ~ 33.85356) OMP:0005002
[Enzymes/Enzyme activity] enzyme activity: alkaline phosphatase (EC3.1.3.1) boolean No robust majority SNOMED:424017009, EC3.1.3.1
[Enzymes/Enzyme activity] enzyme activity: arginine dihydrolase (EC3.5.3.6) boolean No robust majority SNOMED:424017009, EC3.5.3.6
[Genome/Composition] coding density % 86.08 (83.66 ~ 89.22) SIO:001276, mesh:D059646, SNOMED:258755000
[Genome/Composition] GC percentage % 38.68 (38.3 ~ 38.9) mesh:D001482
[Genome/Gene content] estimated gene count genes 2417.92 (1795.4 ~ 2825.9) OBI:0002568, gene, NCIT:C25498
[Genome/Gene content] gene count genes 2001.39 (918 ~ 2762) OBI:0002568, gene
[Genome/Genome size] estimated genome size bp 2431927.47 (1607557.2 ~ 3170662.5) GENEPIO:0001561
[Genome/Genome size] info:genome size bp 2030441.57 (821944 ~ 3101225) GENEPIO:0001561
[Metabolism/Electron acceptor] electron acceptor: sulfate boolean No robust majority CHEBI:17654, CHEBI:16189
[Metabolism/Fermentation] info:fermentation boolean true GO:0006113
[Metabolism/Growth] growth: 42 degrees Celsius boolean true GO:0040007, OMP:0005002
[Metabolism/Growth] growth: bile acid susceptible boolean true GO:0040007, CHEBI:3098
[Metabolism/Growth] growth: blood agar boolean No robust majority GO:0040007, NCIT:C127517
[Metabolism/Growth] growth: chemoheterotrophy boolean true GO:0040007, ECOCORE:00000132
[Metabolism/Growth] growth: D-mannitol boolean true GO:0040007, CHEBI:16899
View All Phenotype Traits

Taxonomy Lineage

Child Taxonomy

taxonomy name rank note
Candidatus Atribacter allofermentans species ncbi_taxid: 1852833 - Candidatus Atribacter allofermentans(species); all_childs:
Atribacter laminatus species ncbi_taxid: 2847778 - Atribacter laminatus(species); all_childs:
unclassified Atribacter no rank ncbi_taxid: 2847779 - unclassified Atribacter(no rank); all_childs: 2847780
Candidatus Atribacter fermentans species ncbi_taxid: 3378220 - Candidatus Atribacter fermentans(species); all_childs:
Candidatus Atribacter alterifermentans species ncbi_taxid: 3378221 - Candidatus Atribacter alterifermentans(species); all_childs:
Candidatus Atribacter hydrocarboniphilus species ncbi_taxid: 3378222 - Candidatus Atribacter hydrocarboniphilus(species); all_childs:

Enzyme Proteins

protein id name ec_number function

Metabolites Taxonomy Source

Creating taxonomically-informed metabolome libraries