Baekduia

ncbi_taxid: 2600304 - Baekduia(genus); all_childs: 496014, 2600306, 2617794, 2997333

taxonomy name: Baekduia (genus)
chinese name:
ancestor: Baekduiaceae (family)
ncbi taxonomy: 2600304
GTDB taxonomy:

Organism Phenotype Traits

Trait Unit Trait Value Ontology Terms
[Environmental preferences/Atmosphere] aerotolerant boolean true MICRO:0000502
[Environmental preferences/Atmosphere] obligate aerobic boolean true OMP:0000185
[Environmental preferences/pH] pH growth pH 6.63 OMP:0005008
[Environmental preferences/pH] pH maximum pH 8.56 OMP:0005008
[Environmental preferences/pH] pH minimum pH 4.53 OMP:0005008
[Environmental preferences/Salinity] salinity growth % NaCl (w/v) 1.07 OMP:0005013
[Environmental preferences/Salinity] salinity maximum % NaCl (w/v) 5.16 OMP:0005013
[Environmental preferences/Salinity] salinity minimum % NaCl (w/v) 1.02 OMP:0005013
[Environmental preferences/Temperature] temperature growth Celsius 28.21 (25 ~ 31.834436) OMP:0005002
[Environmental preferences/Temperature] temperature maximum Celsius 41.05 OMP:0005002
[Environmental preferences/Temperature] temperature minimum Celsius 18.3 OMP:0005002
[Enzymes/Enzyme activity] enzyme activity: arginine dihydrolase (EC3.5.3.6) boolean No robust majority SNOMED:424017009, EC3.5.3.6
[Enzymes/Enzyme activity] enzyme activity: catalase (EC1.11.1.6) boolean true SNOMED:424017009, EC1.11.1.6
[Enzymes/Enzyme activity] enzyme activity: lipase boolean true SNOMED:424017009
[Enzymes/Enzyme activity] enzyme activity: oxidase boolean true SNOMED:424017009
[Enzymes/Enzyme activity] enzyme activity: pyrrolidonyl arylamidase (EC3.4.19.3) boolean true SNOMED:424017009, EC3.4.19.3
[Genome/Composition] coding density % 90.35 SIO:001276, mesh:D059646, SNOMED:258755000
[Genome/Composition] GC percentage % 74 mesh:D001482
[Genome/Gene content] estimated gene count genes 5429.6 OBI:0002568, gene, NCIT:C25498
[Genome/Gene content] gene count genes 5188 OBI:0002568, gene
[Genome/Genome size] estimated genome size bp 5454998.5 GENEPIO:0001561
[Genome/Genome size] info:genome size bp 5212251 GENEPIO:0001561
[Metabolism/Aerobic growth] aerobic growth: chemoheterotrophy boolean true GO:0040007, PATO:0001455, ECOCORE:00000132
[Metabolism/Growth] growth: 42 degrees Celsius boolean true GO:0040007, OMP:0005002
[Metabolism/Growth] growth: 6.5% NaCl boolean true MICRO:0000989
View All Phenotype Traits

Taxonomy Lineage

Child Taxonomy

taxonomy name rank note
Baekduia soli species ncbi_taxid: 496014 - Baekduia soli(species); all_childs:
environmental samples no rank ncbi_taxid: 2600306 - environmental samples(no rank); all_childs: 2600307
unclassified Baekduia no rank ncbi_taxid: 2617794 - unclassified Baekduia(no rank); all_childs: 2600305, 3458296
Baekduia alba species ncbi_taxid: 2997333 - Baekduia alba(species); all_childs:

Enzyme Proteins

protein id name ec_number function

Metabolites Taxonomy Source

Creating taxonomically-informed metabolome libraries