Chromohalobacter japonicus

ncbi_taxid: 223900 - Chromohalobacter japonicus(species); all_childs:

taxonomy name: Chromohalobacter japonicus (species)
chinese name:
ancestor: Chromohalobacter (genus)
ncbi taxonomy: 223900
GTDB taxonomy: 1018060101

Organism Phenotype Traits

Trait Unit Trait Value Ontology Terms
[Environmental preferences/Atmosphere] aerotolerant boolean true MICRO:0000502
[Environmental preferences/Atmosphere] obligate aerobic boolean true OMP:0000185
[Environmental preferences/Atmosphere] oxygen preference factor aerobic MICRO:0000491
[Environmental preferences/pH] pH growth pH 7.5 OMP:0005008
[Environmental preferences/pH] pH maximum pH 9 OMP:0005008
[Environmental preferences/pH] pH minimum pH 5.5 OMP:0005008
[Environmental preferences/pH] pH preference factor alkaliphile OMP:0005008
[Environmental preferences/Salinity] salinity growth % NaCl (w/v) 10 OMP:0005013
[Environmental preferences/Salinity] salinity maximum % NaCl (w/v) 25 OMP:0005013
[Environmental preferences/Salinity] salinity minimum % NaCl (w/v) 5 OMP:0005013
[Environmental preferences/Temperature] temperature growth Celsius 32.5 OMP:0005002
[Environmental preferences/Temperature] temperature maximum Celsius 42 OMP:0005002
[Environmental preferences/Temperature] temperature minimum Celsius 15 OMP:0005002
[Enzymes/Enzyme activity] enzyme activity: catalase (EC1.11.1.6) boolean true SNOMED:424017009, EC1.11.1.6
[Enzymes/Enzyme activity] enzyme activity: gelatinase boolean true SNOMED:424017009
[Enzymes/Enzyme activity] enzyme activity: lipase boolean true SNOMED:424017009
[Enzymes/Enzyme activity] enzyme activity: oxidase boolean true SNOMED:424017009
[Genome/Composition] coding density % 89.29 (88.99 ~ 89.58) SIO:001276, mesh:D059646, SNOMED:258755000
[Genome/Composition] GC percentage % 60.8 (60.5 ~ 61.1) mesh:D001482
[Genome/Gene content] estimated gene count genes 3352.15 (3133.3 ~ 3571) OBI:0002568, gene, NCIT:C25498
[Genome/Gene content] gene count genes 3352 (3133 ~ 3571) OBI:0002568, gene
[Genome/Genome size] estimated genome size bp 3572272.4 (3376620.8 ~ 3767924) GENEPIO:0001561
[Genome/Genome size] info:genome size bp 3572103.5 (3376283 ~ 3767924) GENEPIO:0001561
[Metabolism/Aerobic growth] aerobic growth: chemoheterotrophy boolean true GO:0040007, PATO:0001455, ECOCORE:00000132
[Metabolism/Carbon utilization] carbon source: alanine boolean true GO:0015976, CHEBI:16449
View All Phenotype Traits

Taxonomy Lineage

Child Taxonomy

taxonomy name rank note

Enzyme Proteins

protein id name ec_number function

Metabolites Taxonomy Source

Creating taxonomically-informed metabolome libraries