Agaribacterium haliotis

ncbi_taxid: 2013869 - Agaribacterium haliotis(species); all_childs:

taxonomy name: Agaribacterium haliotis (species)
chinese name:
ancestor: Agaribacterium (genus)
ncbi taxonomy: 2013869
GTDB taxonomy: 1562918495

Organism Phenotype Traits

Trait Unit Trait Value Ontology Terms
[Environmental preferences/Atmosphere] aerotolerant boolean true MICRO:0000502
[Environmental preferences/Atmosphere] obligate aerobic boolean No robust majority OMP:0000185
[Environmental preferences/pH] pH growth pH 7.56 OMP:0005008
[Environmental preferences/pH] pH maximum pH 9.44 OMP:0005008
[Environmental preferences/pH] pH minimum pH 5.58 OMP:0005008
[Environmental preferences/Salinity] salinity growth % NaCl (w/v) 3.05 OMP:0005013
[Environmental preferences/Salinity] salinity maximum % NaCl (w/v) 7.07 OMP:0005013
[Environmental preferences/Salinity] salinity minimum % NaCl (w/v) 1.27 OMP:0005013
[Environmental preferences/Temperature] temperature growth Celsius 23.2 OMP:0005002
[Environmental preferences/Temperature] temperature maximum Celsius 35 (30 ~ 40) OMP:0005002
[Environmental preferences/Temperature] temperature minimum Celsius 22 (16 ~ 28) OMP:0005002
[Enzymes/Enzyme activity] enzyme activity: acid phosphatase (EC3.1.3.2) boolean true SNOMED:424017009, EC3.1.3.2
[Enzymes/Enzyme activity] enzyme activity: alkaline phosphatase (EC3.1.3.1) boolean true SNOMED:424017009, EC3.1.3.1
[Enzymes/Enzyme activity] enzyme activity: alpha-glucosidase (EC3.2.1.20) boolean true SNOMED:424017009, EC3.2.1.20
[Enzymes/Enzyme activity] enzyme activity: beta-galactosidase (EC3.2.1.23) boolean true SNOMED:424017009, EC3.2.1.23
[Enzymes/Enzyme activity] enzyme activity: catalase (EC1.11.1.6) boolean true SNOMED:424017009, EC1.11.1.6
[Enzymes/Enzyme activity] enzyme activity: DNase boolean true SNOMED:424017009
[Enzymes/Enzyme activity] enzyme activity: lipase boolean true SNOMED:424017009
[Enzymes/Enzyme activity] enzyme activity: lysine decarboxylase (EC4.1.1.18) boolean true SNOMED:424017009, EC4.1.1.18
[Enzymes/Enzyme activity] enzyme activity: ornithine decarboxylase (EC4.1.1.17) boolean true SNOMED:424017009, EC4.1.1.17
[Enzymes/Enzyme activity] enzyme activity: oxidase boolean true SNOMED:424017009
[Genome/Composition] coding density % 89.27 SIO:001276, mesh:D059646, SNOMED:258755000
[Genome/Composition] GC percentage % 50.5 mesh:D001482
[Genome/Gene content] estimated gene count genes 3593 OBI:0002568, gene, NCIT:C25498
[Genome/Gene content] gene count genes 3593 OBI:0002568, gene
View All Phenotype Traits

Taxonomy Lineage

Child Taxonomy

taxonomy name rank note

Enzyme Proteins

protein id name ec_number function

Metabolites Taxonomy Source

Creating taxonomically-informed metabolome libraries