Halopseudomonas phragmitis

ncbi_taxid: 1931241 - Halopseudomonas phragmitis(species); all_childs:

taxonomy name: Halopseudomonas phragmitis (species)
chinese name:
ancestor: Halopseudomonas (genus)
ncbi taxonomy: 1931241
GTDB taxonomy: 766405618

Organism Phenotype Traits

Trait Unit Trait Value Ontology Terms
[Environmental preferences/Atmosphere] aerotolerant boolean true MICRO:0000502
[Environmental preferences/Atmosphere] obligate aerobic boolean true OMP:0000185
[Environmental preferences/Atmosphere] oxygen preference factor aerobic MICRO:0000491
[Environmental preferences/pH] pH growth pH 7.9 OMP:0005008
[Environmental preferences/pH] pH maximum pH 10 OMP:0005008
[Environmental preferences/pH] pH minimum pH 6 OMP:0005008
[Environmental preferences/Salinity] salinity growth % NaCl (w/v) 4.1 OMP:0005013
[Environmental preferences/Salinity] salinity maximum % NaCl (w/v) 10 OMP:0005013
[Environmental preferences/Salinity] salinity minimum % NaCl (w/v) OMP:0005013
[Environmental preferences/Temperature] temperature growth Celsius 31.94 OMP:0005002
[Environmental preferences/Temperature] temperature maximum Celsius 41 OMP:0005002
[Environmental preferences/Temperature] temperature minimum Celsius 10 OMP:0005002
[Enzymes/Enzyme activity] enzyme activity: catalase (EC1.11.1.6) boolean true SNOMED:424017009, EC1.11.1.6
[Enzymes/Enzyme activity] enzyme activity: cytochrome oxidase (EC1.9.3.1) boolean true SNOMED:424017009, EC1.9.3.1
[Enzymes/Enzyme activity] enzyme activity: esterase Lipase (C 8) boolean true SNOMED:424017009
[Enzymes/Enzyme activity] enzyme activity: leucine arylamidase (EC3.4.11.1) boolean true SNOMED:424017009, EC3.4.11.1
[Enzymes/Enzyme activity] enzyme activity: lipase boolean true SNOMED:424017009
[Enzymes/Enzyme activity] enzyme activity: naphthol-AS-BI-phosphohydrolase boolean true SNOMED:424017009
[Genome/Composition] coding density % 91.44 SIO:001276, mesh:D059646, SNOMED:258755000
[Genome/Composition] GC percentage % 60.1 mesh:D001482
[Genome/Gene content] estimated gene count genes 3705 OBI:0002568, gene, NCIT:C25498
[Genome/Gene content] gene count genes 3705 OBI:0002568, gene
[Genome/Genome size] estimated genome size bp 4035153 GENEPIO:0001561
[Genome/Genome size] info:genome size bp 4035153 GENEPIO:0001561
[Metabolism/Aerobic growth] aerobic growth: chemoheterotrophy boolean true GO:0040007, PATO:0001455, ECOCORE:00000132
View All Phenotype Traits

Taxonomy Lineage

Child Taxonomy

taxonomy name rank note

Enzyme Proteins

protein id name ec_number function

Metabolites Taxonomy Source

Creating taxonomically-informed metabolome libraries