Athalassotoga

ncbi_taxid: 1769718 - Athalassotoga(genus); all_childs: 1441386, 2622955

taxonomy name: Athalassotoga (genus)
chinese name:
ancestor: Mesoaciditogaceae (family)
ncbi taxonomy: 1769718
GTDB taxonomy:

Organism Phenotype Traits

Trait Unit Trait Value Ontology Terms
[Environmental preferences/Atmosphere] aerotolerant boolean No robust majority MICRO:0000502
[Environmental preferences/Atmosphere] obligate anaerobic boolean true OMP:0000184
[Environmental preferences/Atmosphere] oxygen preference factor aerobic MICRO:0000491
[Environmental preferences/pH] pH growth pH 4.61 OMP:0005008
[Environmental preferences/pH] pH maximum pH 6.6 (6 ~ 7.5) OMP:0005008
[Environmental preferences/pH] pH minimum pH 4.39 (3.1767836 ~ 5.5) OMP:0005008
[Environmental preferences/Salinity] salinity growth % NaCl (w/v) OMP:0005013
[Environmental preferences/Salinity] salinity maximum % NaCl (w/v) 1.97 (1 ~ 2.9491017) OMP:0005013
[Environmental preferences/Salinity] salinity minimum % NaCl (w/v) OMP:0005013
[Environmental preferences/Temperature] temperature growth Celsius 55.59 (55 ~ 56.760254) OMP:0005002
[Environmental preferences/Temperature] temperature maximum Celsius 62.17 (60 ~ 64.34714) OMP:0005002
[Environmental preferences/Temperature] temperature minimum Celsius 32.26 (30 ~ 34.51869) OMP:0005002
[Environmental preferences/Temperature] temperature preference factor thermophilic OMP:0005002
[Environmental preferences/Temperature] thermophilic boolean true MICRO:0000118
[Enzymes/Enzyme activity] enzyme activity: alkaline phosphatase (EC3.1.3.1) boolean true SNOMED:424017009, EC3.1.3.1
[Enzymes/Enzyme activity] enzyme activity: arginine dihydrolase (EC3.5.3.6) boolean true SNOMED:424017009, EC3.5.3.6
[Enzymes/Enzyme activity] enzyme activity: pyrrolidonyl arylamidase (EC3.4.19.3) boolean true SNOMED:424017009, EC3.4.19.3
[Genome/Composition] coding density % 93.96 SIO:001276, mesh:D059646, SNOMED:258755000
[Genome/Composition] GC percentage % 40.4 mesh:D001482
[Genome/Gene content] estimated gene count genes 2157.4 OBI:0002568, gene, NCIT:C25498
[Genome/Gene content] gene count genes 1976 OBI:0002568, gene
[Genome/Genome size] estimated genome size bp 2232775.5 GENEPIO:0001561
[Genome/Genome size] info:genome size bp 2044999 GENEPIO:0001561
[Metabolism/Carbon utilization] carbon source: D-fructose boolean true GO:0015976, CHEBI:15824
[Metabolism/Energy source] energy source: D-fructose boolean true GO:0015980, CHEBI:15824
View All Phenotype Traits

Taxonomy Lineage

Child Taxonomy

taxonomy name rank note
Athalassotoga saccharophila species ncbi_taxid: 1441386 - Athalassotoga saccharophila(species); all_childs:
unclassified Athalassotoga no rank ncbi_taxid: 2622955 - unclassified Athalassotoga(no rank); all_childs: 2022597

Enzyme Proteins

protein id name ec_number function

Metabolites Taxonomy Source

Creating taxonomically-informed metabolome libraries