Aurantimicrobium

ncbi_taxid: 1705353 - Aurantimicrobium(genus); all_childs: 708131, 1705356, 1987356, 2623385

taxonomy name: Aurantimicrobium (genus)
chinese name:
ancestor: Microbacteriaceae (family)
ncbi taxonomy: 1705353
GTDB taxonomy:

Organism Phenotype Traits

Trait Unit Trait Value Ontology Terms
[Environmental preferences/Atmosphere] aerotolerant boolean true MICRO:0000502
[Environmental preferences/Atmosphere] capnophilic boolean No robust majority SNOMED:413748004
[Environmental preferences/Atmosphere] facultative anaerobe boolean No robust majority OMP:0000087
[Environmental preferences/Atmosphere] obligate aerobic boolean No robust majority OMP:0000185
[Environmental preferences/pH] pH growth pH 6.98 (6.688989 ~ 7.2890034) OMP:0005008
[Environmental preferences/pH] pH maximum pH 8.99 (8.579575 ~ 9.560475) OMP:0005008
[Environmental preferences/pH] pH minimum pH 5.34 (5.0849237 ~ 5.6582932) OMP:0005008
[Environmental preferences/Salinity] salinity growth % NaCl (w/v) OMP:0005013
[Environmental preferences/Salinity] salinity maximum % NaCl (w/v) 2.61 (1.4207604 ~ 3.2143757) OMP:0005013
[Environmental preferences/Salinity] salinity minimum % NaCl (w/v) OMP:0005013
[Environmental preferences/Temperature] temperature growth Celsius 29.05 (20 ~ 32.760246) OMP:0005002
[Environmental preferences/Temperature] temperature maximum Celsius 38.38 (36.657875 ~ 40.07049) OMP:0005002
[Environmental preferences/Temperature] temperature minimum Celsius 16.99 (14.542569 ~ 18.829235) OMP:0005002
[Enzymes/Enzyme activity] enzyme activity: alkaline phosphatase (EC3.1.3.1) boolean No robust majority SNOMED:424017009, EC3.1.3.1
[Enzymes/Enzyme activity] enzyme activity: arginine dihydrolase (EC3.5.3.6) boolean true SNOMED:424017009, EC3.5.3.6
[Enzymes/Enzyme activity] enzyme activity: catalase (EC1.11.1.6) boolean true SNOMED:424017009, EC1.11.1.6
[Enzymes/Enzyme activity] enzyme activity: coagulase boolean true SNOMED:424017009
[Enzymes/Enzyme activity] enzyme activity: oxidase boolean true SNOMED:424017009
[Genome/Composition] coding density % 94.07 (93.87 ~ 94.27) SIO:001276, mesh:D059646, SNOMED:258755000
[Genome/Composition] GC percentage % 53.35 (52.4 ~ 54.6) mesh:D001482
[Genome/Gene content] estimated gene count genes 1707.03 (1575.2 ~ 1895.6) OBI:0002568, gene, NCIT:C25498
[Genome/Gene content] gene count genes 1361.29 (1068 ~ 1738) OBI:0002568, gene
[Genome/Genome size] estimated genome size bp 1678352.9 (1609640 ~ 1796904.5) GENEPIO:0001561
[Genome/Genome size] info:genome size bp 1347650.29 (1012376 ~ 1748063) GENEPIO:0001561
[Metabolism/Aerobic growth] aerobic growth: chemoheterotrophy boolean No robust majority GO:0040007, PATO:0001455, ECOCORE:00000132
View All Phenotype Traits

Taxonomy Lineage

Child Taxonomy

taxonomy name rank note
Aurantimicrobium minutum species ncbi_taxid: 708131 - Aurantimicrobium minutum(species); all_childs:
environmental samples no rank ncbi_taxid: 1705356 - environmental samples(no rank); all_childs: 1705357
Aurantimicrobium photophilum species ncbi_taxid: 1987356 - Aurantimicrobium photophilum(species); all_childs:
unclassified Aurantimicrobium no rank ncbi_taxid: 2623385 - unclassified Aurantimicrobium(no rank); all_childs: 1930784, 2079575, 2485149, 2986279

Enzyme Proteins

protein id name ec_number function

Metabolites Taxonomy Source

Creating taxonomically-informed metabolome libraries