Collimonas fungivorans

ncbi_taxid: 158899 - Collimonas fungivorans(species); all_childs: 1005048

taxonomy name: Collimonas fungivorans (species)
chinese name:
ancestor: Collimonas (genus)
ncbi taxonomy: 158899
GTDB taxonomy:

Organism Phenotype Traits

Trait Unit Trait Value Ontology Terms
[Environmental preferences/Atmosphere] aerotolerant boolean true MICRO:0000502
[Environmental preferences/Atmosphere] facultative anaerobe boolean No robust majority OMP:0000087
[Environmental preferences/Atmosphere] obligate aerobic boolean true OMP:0000185
[Environmental preferences/Atmosphere] oxygen preference factor aerobic MICRO:0000491
[Environmental preferences/pH] pH growth pH 6.5 OMP:0005008
[Environmental preferences/pH] pH maximum pH 9.09 (8.979221 ~ 9.2009535) OMP:0005008
[Environmental preferences/pH] pH minimum pH 4.76 (4.6797695 ~ 4.8327475) OMP:0005008
[Environmental preferences/Salinity] salinity growth % NaCl (w/v) OMP:0005013
[Environmental preferences/Salinity] salinity maximum % NaCl (w/v) 0.71 (0.3512856 ~ 1.060602) OMP:0005013
[Environmental preferences/Salinity] salinity minimum % NaCl (w/v) OMP:0005013
[Environmental preferences/Temperature] temperature growth Celsius 24.33 (20 ~ 28) OMP:0005002
[Environmental preferences/Temperature] temperature maximum Celsius 32.5 (30 ~ 35) OMP:0005002
[Environmental preferences/Temperature] temperature minimum Celsius 12.5 (5 ~ 20) OMP:0005002
[Environmental preferences/Temperature] temperature preference factor mesophilic OMP:0005002
[Enzymes/Enzyme activity] enzyme activity: acid phosphatase (EC3.1.3.2) boolean true SNOMED:424017009, EC3.1.3.2
[Enzymes/Enzyme activity] enzyme activity: alkaline phosphatase (EC3.1.3.1) boolean true SNOMED:424017009, EC3.1.3.1
[Enzymes/Enzyme activity] enzyme activity: arginine dihydrolase (EC3.5.3.6) boolean true SNOMED:424017009, EC3.5.3.6
[Enzymes/Enzyme activity] enzyme activity: beta-galactosidase (EC3.2.1.23) boolean true SNOMED:424017009, EC3.2.1.23
[Enzymes/Enzyme activity] enzyme activity: catalase (EC1.11.1.6) boolean true SNOMED:424017009, EC1.11.1.6
[Enzymes/Enzyme activity] enzyme activity: lipase boolean true SNOMED:424017009
[Enzymes/Enzyme activity] enzyme activity: oxidase boolean true SNOMED:424017009
[Enzymes/Enzyme activity] enzyme activity: pyrrolidonyl arylamidase (EC3.4.19.3) boolean true SNOMED:424017009, EC3.4.19.3
[Genome/Composition] coding density % 88.23 (88.21 ~ 88.25) SIO:001276, mesh:D059646, SNOMED:258755000
[Genome/Composition] GC percentage % 59.3 (59 ~ 59.6) mesh:D001482
[Genome/Gene content] estimated gene count genes 4782.5 (4597 ~ 4968) OBI:0002568, gene, NCIT:C25498
View All Phenotype Traits

Taxonomy Lineage

Child Taxonomy

taxonomy name rank note
Collimonas fungivorans Ter331 strain ncbi_taxid: 1005048 - Collimonas fungivorans Ter331(strain); all_childs:

Enzyme Proteins

protein id name ec_number function

Metabolites Taxonomy Source

Creating taxonomically-informed metabolome libraries