Clostridium neonatale

ncbi_taxid: 137838 - Clostridium neonatale(species); all_childs:

taxonomy name: Clostridium neonatale (species)
chinese name:
ancestor: Clostridium (genus)
ncbi taxonomy: 137838
GTDB taxonomy: 1877262992

Organism Phenotype Traits

Trait Unit Trait Value Ontology Terms
[Environmental preferences/Atmosphere] obligate anaerobic boolean true OMP:0000184
[Environmental preferences/Atmosphere] oxygen preference factor aerobic MICRO:0000491
[Environmental preferences/pH] pH growth pH 7.43 (7.2484636 ~ 7.8210344) OMP:0005008
[Environmental preferences/pH] pH maximum pH 9.31 (8.915197 ~ 9.824704) OMP:0005008
[Environmental preferences/pH] pH minimum pH 5.86 (5.67707 ~ 6.193137) OMP:0005008
[Environmental preferences/Salinity] salinity growth % NaCl (w/v) 3.48 (2.2692406 ~ 4.2397714) OMP:0005013
[Environmental preferences/Salinity] salinity maximum % NaCl (w/v) 9.48 (7.3301325 ~ 11.20417) OMP:0005013
[Environmental preferences/Salinity] salinity minimum % NaCl (w/v) 1.4 (0.6887088 ~ 2.0581183) OMP:0005013
[Environmental preferences/Temperature] temperature growth Celsius 37 OMP:0005002
[Environmental preferences/Temperature] temperature maximum Celsius 41.49 (35.782906 ~ 45.646416) OMP:0005002
[Environmental preferences/Temperature] temperature minimum Celsius 17.6 (11.5601225 ~ 21.91218) OMP:0005002
[Enzymes/Enzyme activity] enzyme activity: acid phosphatase (EC3.1.3.2) boolean true SNOMED:424017009, EC3.1.3.2
[Enzymes/Enzyme activity] enzyme activity: alpha-fucosidase (EC3.2.1.51) boolean true SNOMED:424017009, EC3.2.1.51
[Enzymes/Enzyme activity] enzyme activity: alpha-galactosidase (EC3.2.1.22) boolean true SNOMED:424017009, EC3.2.1.22
[Enzymes/Enzyme activity] enzyme activity: alpha-glucosidase (EC3.2.1.20) boolean true SNOMED:424017009, EC3.2.1.20
[Enzymes/Enzyme activity] enzyme activity: amylase boolean true SNOMED:424017009
[Enzymes/Enzyme activity] enzyme activity: arginine dihydrolase (EC3.5.3.6) boolean No robust majority SNOMED:424017009, EC3.5.3.6
[Enzymes/Enzyme activity] enzyme activity: beta-galactosidase (EC3.2.1.23) boolean true SNOMED:424017009, EC3.2.1.23
[Enzymes/Enzyme activity] enzyme activity: beta-glucosidase (EC3.2.1.21) boolean true SNOMED:424017009, EC3.2.1.21
[Enzymes/Enzyme activity] enzyme activity: DNase boolean No robust majority SNOMED:424017009
[Enzymes/Enzyme activity] enzyme activity: lysine decarboxylase (EC4.1.1.18) boolean No robust majority SNOMED:424017009, EC4.1.1.18
[Enzymes/Enzyme activity] enzyme activity: pyrrolidonyl arylamidase (EC3.4.19.3) boolean true SNOMED:424017009, EC3.4.19.3
[Genome/Composition] coding density % 84.11 (71.54 ~ 91.12) SIO:001276, mesh:D059646, SNOMED:258755000
[Genome/Composition] GC percentage % 28.65 (28 ~ 30.6) mesh:D001482
[Genome/Gene content] estimated gene count genes 4225.42 (2319 ~ 5247.5) OBI:0002568, gene, NCIT:C25498
View All Phenotype Traits

Taxonomy Lineage

Child Taxonomy

taxonomy name rank note

Enzyme Proteins

protein id name ec_number function

Metabolites Taxonomy Source

Creating taxonomically-informed metabolome libraries