Carboxydothermus hydrogenoformans

ncbi_taxid: 129958 - Carboxydothermus hydrogenoformans(species); all_childs: 246194

taxonomy name: Carboxydothermus hydrogenoformans (species)
chinese name:
ancestor: Carboxydothermus (genus)
ncbi taxonomy: 129958
GTDB taxonomy: 649384046

Organism Phenotype Traits

Trait Unit Trait Value Ontology Terms
[Environmental preferences/Atmosphere] obligate anaerobic boolean true OMP:0000184
[Environmental preferences/Atmosphere] oxygen preference factor anaerobic MICRO:0000491
[Environmental preferences/pH] pH growth pH 6.8 OMP:0005008
[Environmental preferences/pH] pH maximum pH 8.29 OMP:0005008
[Environmental preferences/pH] pH minimum pH 5.89 OMP:0005008
[Environmental preferences/Salinity] salinity growth % NaCl (w/v) OMP:0005013
[Environmental preferences/Salinity] salinity maximum % NaCl (w/v) OMP:0005013
[Environmental preferences/Salinity] salinity minimum % NaCl (w/v) OMP:0005013
[Environmental preferences/Temperature] temperature growth Celsius 74.75 (65 ~ 78) OMP:0005002
[Environmental preferences/Temperature] temperature maximum Celsius 67.47 OMP:0005002
[Environmental preferences/Temperature] temperature minimum Celsius 43.96 OMP:0005002
[Environmental preferences/Temperature] temperature preference factor thermophilic OMP:0005002
[Environmental preferences/Temperature] thermophilic boolean true MICRO:0000118
[Enzymes/Enzyme activity] enzyme activity: alkaline phosphatase (EC3.1.3.1) boolean true SNOMED:424017009, EC3.1.3.1
[Enzymes/Enzyme activity] enzyme activity: DNase boolean true SNOMED:424017009
[Genome/Composition] coding density % 90.31 SIO:001276, mesh:D059646, SNOMED:258755000
[Genome/Composition] GC percentage % 42 mesh:D001482
[Genome/Gene content] estimated gene count genes 2491.7 OBI:0002568, gene, NCIT:C25498
[Genome/Gene content] gene count genes 2478 OBI:0002568, gene
[Genome/Genome size] estimated genome size bp 2414801.5 GENEPIO:0001561
[Genome/Genome size] info:genome size bp 2401520 GENEPIO:0001561
[Metabolism/Ammonification] ammonification: nitrate boolean true GO:0071941, CHEBI:17632
[Metabolism/Electron acceptor] electron acceptor: nitrite boolean true CHEBI:17654, CHEBI:16301
[Metabolism/Electron acceptor] electron acceptor: sulfur compounds boolean true CHEBI:17654, CHEBI:26833
[Metabolism/Electron acceptor] electron acceptor: thiosulfate boolean true CHEBI:17654, CHEBI:16094
View All Phenotype Traits

Taxonomy Lineage

Child Taxonomy

taxonomy name rank note
Carboxydothermus hydrogenoformans Z-2901 strain ncbi_taxid: 246194 - Carboxydothermus hydrogenoformans Z-2901(strain); all_childs:

Enzyme Proteins

protein id name ec_number function

Metabolites Taxonomy Source

Creating taxonomically-informed metabolome libraries