Halorhodospira halophila

ncbi_taxid: 1053 - Halorhodospira halophila(species); all_childs: 349124

taxonomy name: Halorhodospira halophila (species)
chinese name:
ancestor: Halorhodospira (genus)
ncbi taxonomy: 1053
GTDB taxonomy:

Organism Phenotype Traits

Trait Unit Trait Value Ontology Terms
[Environmental preferences/Atmosphere] aerotolerant boolean No robust majority MICRO:0000502
[Environmental preferences/Atmosphere] obligate aerobic boolean No robust majority OMP:0000185
[Environmental preferences/Atmosphere] obligate anaerobic boolean No robust majority OMP:0000184
[Environmental preferences/Atmosphere] oxygen preference factor aerobic MICRO:0000491
[Environmental preferences/pH] pH growth pH 9.15 (8.893243 ~ 9.251662) OMP:0005008
[Environmental preferences/pH] pH maximum pH 11.04 (10.7267885 ~ 11.246586) OMP:0005008
[Environmental preferences/pH] pH minimum pH 7.4 (7.280885 ~ 7.4428024) OMP:0005008
[Environmental preferences/Salinity] salinity growth % NaCl (w/v) 10.08 (9.578962 ~ 11.105893) OMP:0005013
[Environmental preferences/Salinity] salinity maximum % NaCl (w/v) 20.8 (19.782673 ~ 22.261932) OMP:0005013
[Environmental preferences/Salinity] salinity minimum % NaCl (w/v) 4.81 (4.6096687 ~ 5.0284367) OMP:0005013
[Environmental preferences/Salinity] salinity preference factor halophile OMP:0005013
[Environmental preferences/Temperature] temperature growth Celsius 25 OMP:0005002
[Environmental preferences/Temperature] temperature maximum Celsius 52.93 (51.731453 ~ 54.45019) OMP:0005002
[Environmental preferences/Temperature] temperature minimum Celsius 23.71 (22.609043 ~ 25.158527) OMP:0005002
[Enzymes/Enzyme activity] enzyme activity: alkaline phosphatase (EC3.1.3.1) boolean true SNOMED:424017009, EC3.1.3.1
[Enzymes/Enzyme activity] enzyme activity: catalase (EC1.11.1.6) boolean No robust majority SNOMED:424017009, EC1.11.1.6
[Enzymes/Enzyme activity] enzyme activity: coagulase boolean No robust majority SNOMED:424017009
[Enzymes/Enzyme activity] enzyme activity: DNase boolean true SNOMED:424017009
[Enzymes/Enzyme activity] enzyme activity: lipase boolean No robust majority SNOMED:424017009
[Enzymes/Enzyme activity] enzyme activity: lysine decarboxylase (EC4.1.1.18) boolean true SNOMED:424017009, EC4.1.1.18
[Enzymes/Enzyme activity] enzyme activity: ornithine decarboxylase (EC4.1.1.17) boolean true SNOMED:424017009, EC4.1.1.17
[Enzymes/Enzyme activity] enzyme activity: oxidase boolean true SNOMED:424017009
[Genome/Composition] coding density % 92.6 (91.69 ~ 93.46) SIO:001276, mesh:D059646, SNOMED:258755000
[Genome/Composition] GC percentage % 68.46 (67.9 ~ 69) mesh:D001482
[Genome/Gene content] estimated gene count genes 2633.49 (2462 ~ 3081.3) OBI:0002568, gene, NCIT:C25498
View All Phenotype Traits

Taxonomy Lineage

Child Taxonomy

taxonomy name rank note
Halorhodospira halophila SL1 strain ncbi_taxid: 349124 - Halorhodospira halophila SL1(strain); all_childs:

Enzyme Proteins

protein id name ec_number function
P42516 [UniProt] pcl 6.2.1.12 4-coumarate--CoA ligase

Metabolites Taxonomy Source

Creating taxonomically-informed metabolome libraries