Armatimonas

ncbi_taxid: 1042315 - Armatimonas(genus); all_childs: 685828, 1920857, 2627906

taxonomy name: Armatimonas (genus)
chinese name:
ancestor: Armatimonadaceae (family)
ncbi taxonomy: 1042315
GTDB taxonomy:

Organism Phenotype Traits

Trait Unit Trait Value Ontology Terms
[Environmental preferences/Atmosphere] aerotolerant boolean true MICRO:0000502
[Environmental preferences/Atmosphere] obligate aerobic boolean true OMP:0000185
[Environmental preferences/Atmosphere] oxygen preference factor aerobic MICRO:0000491
[Environmental preferences/pH] pH growth pH 6.78 (6.5 ~ 7.058759) OMP:0005008
[Environmental preferences/pH] pH maximum pH 9 OMP:0005008
[Environmental preferences/pH] pH minimum pH 5.73 OMP:0005008
[Environmental preferences/Salinity] salinity growth % NaCl (w/v) 0.75 OMP:0005013
[Environmental preferences/Salinity] salinity maximum % NaCl (w/v) 0.99 OMP:0005013
[Environmental preferences/Salinity] salinity minimum % NaCl (w/v) 0.53 OMP:0005013
[Environmental preferences/Temperature] temperature growth Celsius 30.42 (30 ~ 30.835028) OMP:0005002
[Environmental preferences/Temperature] temperature maximum Celsius 37.37 (35 ~ 39.746765) OMP:0005002
[Environmental preferences/Temperature] temperature minimum Celsius 22.93 (15.85977 ~ 30) OMP:0005002
[Enzymes/Enzyme activity] enzyme activity: alkaline phosphatase (EC3.1.3.1) boolean true SNOMED:424017009, EC3.1.3.1
[Enzymes/Enzyme activity] enzyme activity: beta-galactosidase (EC3.2.1.23) boolean No robust majority SNOMED:424017009, EC3.2.1.23
[Enzymes/Enzyme activity] enzyme activity: catalase (EC1.11.1.6) boolean true SNOMED:424017009, EC1.11.1.6
[Enzymes/Enzyme activity] enzyme activity: coagulase boolean true SNOMED:424017009
[Enzymes/Enzyme activity] enzyme activity: DNase boolean true SNOMED:424017009
[Enzymes/Enzyme activity] enzyme activity: lysine decarboxylase (EC4.1.1.18) boolean true SNOMED:424017009, EC4.1.1.18
[Enzymes/Enzyme activity] enzyme activity: oxidase boolean true SNOMED:424017009
[Enzymes/Enzyme activity] enzyme activity: pyrrolidonyl arylamidase (EC3.4.19.3) boolean true SNOMED:424017009, EC3.4.19.3
[Genome/Composition] coding density % 93.31 SIO:001276, mesh:D059646, SNOMED:258755000
[Genome/Composition] GC percentage % 62.4 mesh:D001482
[Genome/Gene content] estimated gene count genes 5943 OBI:0002568, gene, NCIT:C25498
[Genome/Gene content] gene count genes 5836 OBI:0002568, gene
[Genome/Genome size] estimated genome size bp 6441878 GENEPIO:0001561
View All Phenotype Traits

Taxonomy Lineage

Child Taxonomy

taxonomy name rank note
Armatimonas rosea species ncbi_taxid: 685828 - Armatimonas rosea(species); all_childs:
environmental samples no rank ncbi_taxid: 1920857 - environmental samples(no rank); all_childs: 1920858
unclassified Armatimonas no rank ncbi_taxid: 2627906 - unclassified Armatimonas(no rank); all_childs: 1872638

Enzyme Proteins

protein id name ec_number function

Metabolites Taxonomy Source

Creating taxonomically-informed metabolome libraries