Deoxyuridine

Deoxyuridine, also known as dU, belongs to the class of organic compounds known as pyrimidine 2'-deoxyribonucleosides. Pyrimidine 2'-deoxyribonucleosides are compounds consisting of a pyrimidine linked to a ribose which lacks a hydroxyl group at position 2. It is similar in chemical structure to uridine, but without the 2'-hydroxyl group. Deoxyuridine exists in all living organisms, ranging from bacteria to humans. Within humans, deoxyuridine participates in a number of enzymatic reactions. In particular, deoxyuridine can be biosynthesized from deoxycytidine through its interaction with the enzyme cytidine deaminase. In addition, deoxyuridine can be converted into uracil and deoxyribose 1-phosphate through its interaction with the enzyme thymidine phosphorylase. Deoxyuridine is considered to be an antimetabolite that is converted into deoxyuridine triphosphate during DNA synthesis. Laboratory suppression of deoxyuridine is used to diagnose megaloblastic anemia due to vitamin B12 and folate deficiencies. In humans, deoxyuridine is involved in the metabolic disorder called UMP synthase deficiency (orotic aciduria). Outside of the human body, deoxyuridine has been detected, but not quantified in, several different foods, such as lichee, highbush blueberries, agaves, macadamia nut (M. tetraphylla), and red bell peppers. This could make deoxyuridine a potential biomarker for the consumption of these foods.

ID EC Number Name
KEGG:R01879 1.14.11.3 2-deoxyuridine,2-oxoglutarate:oxygen oxidoreductase (2'-hydroxylating)
KEGG:R02099 2.7.1.21 ATP:deoxyuridine 5'-phosphotransferase
KEGG:R02102 3.1.3.5 2'-deoxyuridine 5'-monophosphate phosphohydrolase
KEGG:R02484 2.4.2.2 deoxyuridine:orthophosphate 2-deoxy-D-ribosyltransferase;
KEGG:R02485 3.5.4.5 deoxycytidine aminohydrolase
KEGG:R02486 1.14.11.10 2-deoxyuridine,2-oxoglutarate:oxygen oxidoreductase (1'-hydroxylating)
BioCyc:CYTIDEAM-RXN 3.5.4.5 PROTON + WATER + DEOXYCYTIDINE --> DEOXYURIDINE + AMMONIUM
BioCyc:DURIDKI-RXN 2.7.1.145 DEOXYURIDINE + ATP --> PROTON + DUMP + ADP
BioCyc:URA-PHOSPH-RXN 2.4.2.3 DEOXYURIDINE + Pi --> DEOXY-D-RIBOSE-1-PHOSPHATE + URACIL
BioCyc:TRANS-RXN-108F deoxyuridine:proton symport
BioCyc:RXN-14523 3.1.3.34 CPD-15393 + WATER --> DEOXYURIDINE + Pi
BioCyc:RXN-14143 3.1.3.89 DUMP + WATER --> DEOXYURIDINE + Pi
Rhea:RHEA:13434 3.5.4.5 2'-deoxycytidine + H2O + H+ => 2'-deoxyuridine + NH4+
Rhea:RHEA:13435 3.5.4.5 2'-deoxyuridine + NH4+ => 2'-deoxycytidine + H2O + H+
Rhea:RHEA:13436 3.5.4.5 2'-deoxycytidine + H2O + H+ <=> 2'-deoxyuridine + NH4+
Rhea:RHEA:21077 1.14.11.3 2'-deoxyuridine + 2-oxoglutarate + O2 => uridine + succinate + CO2
Rhea:RHEA:21078 1.14.11.3 uridine + succinate + CO2 => 2'-deoxyuridine + 2-oxoglutarate + O2
Rhea:RHEA:21079 1.14.11.3 2'-deoxyuridine + 2-oxoglutarate + O2 <=> uridine + succinate + CO2
Rhea:RHEA:22825 2.4.2.2 2'-deoxyuridine + phosphate => 2-deoxy-α-D-ribose 1-phosphate + uracil
Rhea:RHEA:22826 2.4.2.2 2-deoxy-α-D-ribose 1-phosphate + uracil => 2'-deoxyuridine + phosphate
Rhea:RHEA:22827 2.4.2.2 2'-deoxyuridine + phosphate <=> 2-deoxy-α-D-ribose 1-phosphate + uracil
Rhea:RHEA:23317 1.14.11.10 2'-deoxyuridine + 2-oxoglutarate + O2 => 2-deoxy-D-ribono-1,4-lactone + uracil + succinate + CO2
Rhea:RHEA:23318 1.14.11.10 2-deoxy-D-ribono-1,4-lactone + uracil + succinate + CO2 => 2'-deoxyuridine + 2-oxoglutarate + O2
Rhea:RHEA:23319 1.14.11.10 2'-deoxyuridine + 2-oxoglutarate + O2 <=> 2-deoxy-D-ribono-1,4-lactone + uracil + succinate + CO2
Rhea:RHEA:28207 2'-deoxyuridine + ATP => dUMP + ADP + H+
Rhea:RHEA:28208 dUMP + ADP + H+ => 2'-deoxyuridine + ATP
Rhea:RHEA:28209 2'-deoxyuridine + ATP <=> dUMP + ADP + H+
Rhea:RHEA:29356 dUMP + H2O => 2'-deoxyuridine + phosphate
Rhea:RHEA:29357 2'-deoxyuridine + phosphate => dUMP + H2O
Rhea:RHEA:29358 dUMP + H2O <=> 2'-deoxyuridine + phosphate