Pathways Knowlegdes

Biological pathway database

Pathway DOIs Note
very long chain fatty acid biosynthesis

Accession ID: BioCyc:LEISH_PWY-5080
  • 10.1038/nrmicro1617
  • 10.1098/rstb.1997.0113
 Lee SH, Stephens JL, Englund PT. A fatty-acid synthesis mechanism specialized for parasitism. Nat Rev Microbiol. 2007 Apr;5(4):287–97. doi: 10.1038/nrmicro1617. PMID: 17363967.; Ferguson MA. The surface glycoconjugates of trypanosomatid parasites. Philos Trans R Soc Lond B Biol Sci. 1997 Sep 29;352(1359):1295–302. PMID: 9355120; PMCID: PMC1692025.
fatty acid biosynthesis -- elongase pathway

Accession ID: BioCyc:LEISH_PWY3IU-15
  • 10.1038/nrmicro1617
 Lee SH, Stephens JL, Englund PT. A fatty-acid synthesis mechanism specialized for parasitism. Nat Rev Microbiol. 2007 Apr;5(4):287–97. doi: 10.1038/nrmicro1617. PMID: 17363967.
Metabolism and regulation

Accession ID: Plant Reactome:R-OAU-2744345		 -
Secondary metabolism

Accession ID: Plant Reactome:R-TAE-2744344		 -
Flavonoid biosynthesis

Accession ID: Plant Reactome:R-TAE-1119531
  • 10.1104/pp.127.1.46
  • 10.1139/g05-026
 Himi E, Nisar A, Noda K. Colour genes (R and Rc) for grain and coleoptile upregulate flavonoid biosynthesis genes in wheat. Genome. 2005 Aug 01;48(4):747–54. doi: 10.1139/g05-026.; Dong X, Braun EL, Grotewold E. Functional conservation of plant secondary metabolic enzymes revealed by complementation of Arabidopsis flavonoid mutants with maize genes. Plant Physiol. 2001 Sep;127(1):46–57. PMID: 11553733; PMCID: PMC117961.
Metabolism and regulation

Accession ID: Plant Reactome:R-MES-2744345		 -
Metabolism and regulation

Accession ID: Plant Reactome:R-TDI-2744345		 -
Resveratrol biosynthesis

Accession ID: Plant Reactome:R-TDI-1119630		 -
Metabolism and regulation

Accession ID: Plant Reactome:R-DRO-2744345		 -
Flavonoid biosynthesis

Accession ID: Plant Reactome:R-DRO-1119531
  • 10.1104/pp.127.1.46
  • 10.1139/g05-026
 Himi E, Nisar A, Noda K. Colour genes (R and Rc) for grain and coleoptile upregulate flavonoid biosynthesis genes in wheat. Genome. 2005 Aug 01;48(4):747–54. doi: 10.1139/g05-026.; Dong X, Braun EL, Grotewold E. Functional conservation of plant secondary metabolic enzymes revealed by complementation of Arabidopsis flavonoid mutants with maize genes. Plant Physiol. 2001 Sep;127(1):46–57. PMID: 11553733; PMCID: PMC117961.
Pinobanksin biosynthesis

Accession ID: Plant Reactome:R-DRO-1119513		 -
Resveratrol biosynthesis

Accession ID: Plant Reactome:R-OGU-1119630		 -
Pinobanksin biosynthesis

Accession ID: Plant Reactome:R-OMI-1119513		 -
Metabolism and regulation

Accession ID: Plant Reactome:R-PTI-2744345		 -
Pinobanksin biosynthesis

Accession ID: Plant Reactome:R-PTI-1119513		 -
Flavonoid biosynthesis

Accession ID: Plant Reactome:R-GMA-1119531
  • 10.1104/pp.127.1.46
  • 10.1139/g05-026
 Himi E, Nisar A, Noda K. Colour genes (R and Rc) for grain and coleoptile upregulate flavonoid biosynthesis genes in wheat. Genome. 2005 Aug 01;48(4):747–54. doi: 10.1139/g05-026.; Dong X, Braun EL, Grotewold E. Functional conservation of plant secondary metabolic enzymes revealed by complementation of Arabidopsis flavonoid mutants with maize genes. Plant Physiol. 2001 Sep;127(1):46–57. PMID: 11553733; PMCID: PMC117961.
Metabolism and regulation

Accession ID: Plant Reactome:R-PDA-2744345		 -
Pinobanksin biosynthesis

Accession ID: Plant Reactome:R-PDA-1119513		 -
Metabolism and regulation

Accession ID: Plant Reactome:R-PVU-2744345		 -
Pinobanksin biosynthesis

Accession ID: Plant Reactome:R-DCA-1119513		 -