Pathways Knowlegdes

Biological pathway database

Pathway DOIs Note
adenine salvage

Accession ID: BioCyc:MSMI420247_PWY-6610		 -
superpathway of purine nucleotide salvage

Accession ID: BioCyc:HUMAN_PWY66-409
  • 10.1016/s0021-9258(19)83606-2
  • 10.1073/pnas.93.3.1232
 Spychala J, Datta NS, Takabayashi K, Datta M, Fox IH, Gribbin T, Mitchell BS. Cloning of human adenosine kinase cDNA: sequence similarity to microbial ribokinases and fructokinases. Proc. Natl. Acad. Sci. U.S.A. 1996 Feb 06;93(3):1232–7. doi: 10.1073/pnas.93.3.1232.; Lewis AS, Lowy BA. Human erythrocyte purine nucleoside phosphorylase: molecular weight and physical properties. A Theorell-Chance catalytic mechanism. Journal of Biological Chemistry. 1979 Oct;254(19):9927–32. doi: 10.1016/s0021-9258(19)83606-2.
adenosine nucleotides degradation I

Accession ID: BioCyc:META_PWY-6596
  • 10.1074/jbc.m312929200
  • 10.1104/pp.115.4.1307
 Hesberg C, Hänsch R, Mendel RR, Bittner F. Tandem orientation of duplicated xanthine dehydrogenase genes from Arabidopsis thaliana: differential gene expression and enzyme activities. J Biol Chem. 2004 Apr 02;279(14):13547–54. doi: 10.1074/jbc.m312929200. PMID: 14726515.; Capote-Maínez N, Sánchez F. Characterization of the common bean uricase II and its expression in organs other than nodules. Plant Physiol. 1997 Dec;115(4):1307–17. PMID: 9414545; PMCID: PMC158596.
purine ribonucleosides degradation

Accession ID: BioCyc:META_PWY0-1296
  • 10.1016/s0163-7258(00)00097-8
  • 10.1046/j.1432-1033.2002.03097.x
 Stoychev G, Kierdaszuk B, Shugar D. Xanthosine and xanthine. Substrate properties with purine nucleoside phosphorylases, and relevance to other enzyme systems. Eur J Biochem. 2002 Aug;269(16):4048–57. doi: 10.1046/j.1432-1033.2002.03097.x. PMID: 12180982.; Bzowska A, Kulikowska E, Shugar D. Purine nucleoside phosphorylases: properties, functions, and clinical aspects. Pharmacol Ther. 2000 Dec;88(3):349–425. doi: 10.1016/s0163-7258(00)00097-8. PMID: 11337031.
superpathway of purines degradation in plants

Accession ID: BioCyc:META_P165-PWY
  • 10.1006/abio.1994.1515
  • 10.1016/0304-4165(92)90074-5
 Pineda M, Piedras P, Cárdenas J. A continuous spectrophotometric assay for ureidoglycolase activity with lactate dehydrogenase or glyoxylate reductase as coupling enzyme. Anal Biochem. 1994 Nov 01;222(2):450–5. doi: 10.1006/abio.1994.1515. PMID: 7864371.; Pérez-Vecinte R, Alamillo JM, Cárdenas J, Pineda M. Purification and substrate inactivation of xanthine dehydrogenase from Chlamydomonasreinhardtii. Biochimica et Biophysica Acta (BBA) - General Subjects. 1992 Sep;1117(2):159–66. doi: 10.1016/0304-4165(92)90074-5.
adenosine nucleotides degradation I

Accession ID: BioCyc:ARA_PWY-6596
  • 10.1074/jbc.m312929200
  • 10.1104/pp.115.4.1307
 Hesberg C, Hänsch R, Mendel RR, Bittner F. Tandem orientation of duplicated xanthine dehydrogenase genes from Arabidopsis thaliana: differential gene expression and enzyme activities. J Biol Chem. 2004 Apr 02;279(14):13547–54. doi: 10.1074/jbc.m312929200. PMID: 14726515.; Capote-Maínez N, Sánchez F. Characterization of the common bean uricase II and its expression in organs other than nodules. Plant Physiol. 1997 Dec;115(4):1307–17. PMID: 9414545; PMCID: PMC158596.
purine ribonucleosides degradation

Accession ID: BioCyc:VCHO_PWY0-1296		 -
adenine and adenosine salvage III

Accession ID: BioCyc:VCHO_PWY-6609		 -
adenosine nucleotides degradation II

Accession ID: BioCyc:SHIGELLA_SALVADEHYPOX-PWY		 -
purine ribonucleosides degradation

Accession ID: BioCyc:MTBH37RV_PWY0-1296		 -
purine deoxyribonucleosides degradation I

Accession ID: BioCyc:MTBH37RV_PWY-7179		 -
adenine and adenosine salvage III

Accession ID: BioCyc:MTBH37RV_PWY-6609		 -
adenine and adenosine salvage III

Accession ID: BioCyc:MTBCDC1551_PWY-6609		 -
purine deoxyribonucleosides degradation I

Accession ID: BioCyc:HPY_PWY-7179		 -
adenine and adenosine salvage IV

Accession ID: BioCyc:ECOO157_PWY-6610		 -
adenosine nucleotides degradation II

Accession ID: BioCyc:ECOL199310_SALVADEHYPOX-PWY		 -
adenine and adenosine salvage III

Accession ID: BioCyc:ECOL199310_PWY-6609		 -
purine ribonucleosides degradation

Accession ID: BioCyc:ANTHRA_PWY0-1296		 -
purine ribonucleosides degradation

Accession ID: BioCyc:AGRO_PWY0-1296		 -
adenine and adenosine salvage III

Accession ID: BioCyc:AGRO_PWY-6609		 -