Pathways Knowlegdes

Biological pathway database

Pathway DOIs Note
propionyl CoA degradation

Accession ID: BioCyc:MTBCDC1551_PROPIONMET-PWY		 -
L-arginine biosynthesis IV (archaebacteria)

Accession ID: BioCyc:MTBCDC1551_PWY-7400		 -
superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis

Accession ID: BioCyc:HPY_PWY-7211		 -
superpathway of pyrimidine ribonucleotides de novo biosynthesis

Accession ID: BioCyc:HPY_PWY0-162		 -
valine degradation I

Accession ID: BioCyc:ECOO157_VALDEG-PWY		 -
respiration (anaerobic)

Accession ID: BioCyc:ECOL199310_ANARESP1-PWY		 -
mixed acid fermentation

Accession ID: BioCyc:CAULO_FERMENTATION-PWY		 -
L-arginine biosynthesis I (via L-ornithine)

Accession ID: BioCyc:ANTHRA_ARGSYN-PWY		 -
L-valine degradation I

Accession ID: BioCyc:ANTHRA_VALDEG-PWY		 -
urea cycle

Accession ID: BioCyc:ANTHRA_PWY-4984		 -
L-leucine degradation I

Accession ID: BioCyc:AGRO_LEU-DEG2-PWY		 -
superpathway of pyrimidine ribonucleotides de novo biosynthesis

Accession ID: BioCyc:AGRO_PWY0-162		 -
L-arginine biosynthesis II (acetyl cycle)

Accession ID: BioCyc:AURANTIMONAS_ARGSYNBSUB-PWY		 -
inosine-5'-phosphate biosynthesis I

Accession ID: BioCyc:AURANTIMONAS_PWY-6123		 -
superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis

Accession ID: BioCyc:AURANTIMONAS_PWY-7211		 -
pyrimidine ribonucleotides de novo biosynthesis

Accession ID: BioCyc:MOUSE_PWY0-162		 -
leucine degradation I

Accession ID: BioCyc:SMAN_LEU-DEG2-PWY		 -
valine degradation III

Accession ID: BioCyc:SCO_PWY1UA-1584
  • 10.1099/00221287-145-9-2323
 Zhang Y, Denoya CD, Skinner DD, Fedechko RW, McArthur HAI, Morgenstern MR, Davies RA, Lobo S, Reynolds KA, Hutchinson CR. Genes encoding acyl-CoA dehydrogenase (AcdH) homologues from Streptomyces coelicolor and Streptomyces avermitilis provide insights into the metabolism of small branched-chain fatty acids and macrolide antibiotic production The GenBank accession numbers for the sequences described in this paper are AF142581 (Streptomyces coelicolor) and AF143210 (Streptomyces avermitilis). 1999 Sep 01;145(9):2323–34. doi: 10.1099/00221287-145-9-2323.
aspartate threonine lysine biosynthesis superpathway

Accession ID: BioCyc:SCO_PWY1UA-1793		 -
propanoyl CoA degradation I

Accession ID: BioCyc:SCO_PROPIONMET-PWY		 -