Pathways Knowlegdes

Biological pathway database

Pathway DOIs Note
guanine and guanosine salvage III

Accession ID: BioCyc:CLOSSAC_PWY-6618		 -
purine ribonucleosides degradation

Accession ID: BioCyc:PDIF272563_PWY0-1296		 -
guanosine nucleotides degradation III

Accession ID: BioCyc:BTHE_PWY-6608		 -
guanosine nucleotides degradation III

Accession ID: BioCyc:CORYNE_PWY-6608		 -
guanine and guanosine salvage II

Accession ID: BioCyc:CORYNE_PWY-6599		 -
guanine and guanosine salvage

Accession ID: BioCyc:LACTORHA_PWY-6620		 -
guanine and guanosine salvage

Accession ID: BioCyc:FAECPRAU_PWY-6620		 -
guanine and guanosine salvage II

Accession ID: BioCyc:COLLINSAERO_PWY-6599		 -
guanosine nucleotides degradation

Accession ID: BioCyc:HUMAN_PWY-6608		 -
purine ribonucleosides degradation to ribose-1-phosphate

Accession ID: BioCyc:HUMAN_PWY0-1296		 -
guanine and guanosine salvage

Accession ID: BioCyc:HUMAN_PWY-6620
  • 10.1016/s0021-9258(19)83606-2
  • 10.1021/bi9616007
 Xu Y, Eads J, Sacchettini JC, Grubmeyer C. Kinetic mechanism of human hypoxanthine-guanine phosphoribosyltransferase: rapid phosphoribosyl transfer chemistry. Biochemistry. 1997 Mar 25;36(12):3700–12. doi: 10.1021/bi9616007. PMID: 9132023.; Lewis AS, Lowy BA. Human erythrocyte purine nucleoside phosphorylase: molecular weight and physical properties. A Theorell-Chance catalytic mechanism. Journal of Biological Chemistry. 1979 Oct;254(19):9927–32. doi: 10.1016/s0021-9258(19)83606-2.
nucleoside and nucleotide degradation (archaea)

Accession ID: BioCyc:META_PWY-5532
  • 10.1038/nchembio.1786
  • 10.1126/science.1135999
 Aono R, Sato T, Imanaka T, Atomi H. A pentose bisphosphate pathway for nucleoside degradation in Archaea. Nat Chem Biol. 2015 May;11(5):355–60. doi: 10.1038/nchembio.1786. PMID: 25822915.; Sato T, Atomi H, Imanaka T. Archaeal type III RuBisCOs function in a pathway for AMP metabolism. Science. 2007 Feb 16;315(5814):1003–6. doi: 10.1126/science.1135999. PMID: 17303759.
superpathway of guanine and guanosine salvage

Accession ID: BioCyc:META_PWY-6579
  • 10.1111/j.1432-1033.1975.tb03925.x
  • 10.1271/bbb.65.1230
 MATSUI H, SHIMAOKA M, TAKENAKA Y, KAWASAKI H, KURAHASHI O. gsk Disruption Leads to Guanosine Accumulation in Escherichia coli. Bioscience, Biotechnology, and Biochemistry. 2001 Jan;65(5):1230–5. doi: 10.1271/bbb.65.1230.; Jensen KF, Nygaard P. Purine nucleoside phosphorylase from Escherichia coli and Salmonella typhimurium. Purification and some properties. Eur J Biochem. 1975 Feb 03;51(1):253–65. doi: 10.1111/j.1432-1033.1975.tb03925.x. PMID: 235429.
guanosine nucleotides degradation III

Accession ID: BioCyc:META_PWY-6608
  • 10.1016/s1046-5928(02)00602-2
 Silva RG, Carvalho LPS, Oliveira JS, Pinto CA, Mendes MA, Palma MS, Basso LA, Santos DS. Cloning, overexpression, and purification of functional human purine nucleoside phosphorylase. Protein Expression and Purification. 2003 Jan;27(1):158–64. doi: 10.1016/s1046-5928(02)00602-2.
guanosine ribonucleotides de novo biosynthesis

Accession ID: BioCyc:ECO_PWY-7221		 -
guanine and guanosine salvage I

Accession ID: BioCyc:YEAST_PWY-6620		 -
purine ribonucleosides degradation to ribose-1-phosphate

Accession ID: BioCyc:YEAST_PWY0-1296		 -
guanosine nucleotides degradation II

Accession ID: BioCyc:ARA_PWY-6606
  • 10.1016/s0944-5013(11)80008-x
 Elshafei AM, Abu-Shady MR, el-Beih FM, Mohamed LA. Mode and extent of degradation of adenosine and guanosine by extracts of Aspergillus terricola. Microbiol Res. 1995 Sep;150(3):291–5. doi: 10.1016/s0944-5013(11)80008-x. PMID: 7551735.
purine nucleosides salvage II (plant)

Accession ID: BioCyc:ARA_PWY-5043		 -
guanosine nucleotides degradation I

Accession ID: BioCyc:ARA_PWY-6607
  • 10.1074/jbc.m312929200
 Hesberg C, Hänsch R, Mendel RR, Bittner F. Tandem orientation of duplicated xanthine dehydrogenase genes from Arabidopsis thaliana: differential gene expression and enzyme activities. J Biol Chem. 2004 Apr 02;279(14):13547–54. doi: 10.1074/jbc.m312929200. PMID: 14726515.