Pathways Knowlegdes

Biological pathway database

Pathway DOIs Note
purine nucleotides degradation I (plants)

Accession ID: BioCyc:META_PWY-5044
  • 10.1074/jbc.m312929200
  • 10.1104/pp.115.4.1307
 Hesberg C, Hänsch R, Mendel RR, Bittner F. Tandem orientation of duplicated xanthine dehydrogenase genes from Arabidopsis thaliana: differential gene expression and enzyme activities. J Biol Chem. 2004 Apr 02;279(14):13547–54. doi: 10.1074/jbc.m312929200. PMID: 14726515.; Capote-Maínez N, Sánchez F. Characterization of the common bean uricase II and its expression in organs other than nodules. Plant Physiol. 1997 Dec;115(4):1307–17. PMID: 9414545; PMCID: PMC158596.
guanine and guanosine salvage

Accession ID: BioCyc:META_PWY-6620
  • 10.1016/s0021-9258(18)32201-4
  • 10.1016/s0021-9258(19)83606-2
  • 10.1021/bi9616007
  • 10.1111/j.1432-1033.1971.tb01345.x
 Xu Y, Eads J, Sacchettini JC, Grubmeyer C. Kinetic mechanism of human hypoxanthine-guanine phosphoribosyltransferase: rapid phosphoribosyl transfer chemistry. Biochemistry. 1997 Mar 25;36(12):3700–12. doi: 10.1021/bi9616007. PMID: 9132023.; Liu SW, Milman G. Purification and characterization of Escherichia coli guanine-xanthine phosphoribosyltransferase produced by a high efficiency expression plasmid utilizing a lambda PL promoter and CI857 temperature-sensitive repressor. Journal of Biological Chemistry. 1983 Jun;258(12):7469–75. doi: 10.1016/s0021-9258(18)32201-4.; Lewis AS, Lowy BA. Human erythrocyte purine nucleoside phosphorylase: molecular weight and physical properties. A Theorell-Chance catalytic mechanism. Journal of Biological Chemistry. 1979 Oct;254(19):9927–32. doi: 10.1016/s0021-9258(19)83606-2.; Hammer-Jespersen K, Munch-Petersen A, Nygaard P, Schwartz M. Induction of Enzymes Involved in the Catabolism of Deoxyribonucleosides and Ribonucleosides in Escherichia coli K 12. European Journal of Biochemistry. 1971 Apr;19(4):533–8. doi: 10.1111/j.1432-1033.1971.tb01345.x.
superpathway of purine nucleotide salvage

Accession ID: BioCyc:META_PWY66-409
  • 10.1016/s0021-9258(19)83606-2
  • 10.1016/s0163-7258(00)00097-8
  • 10.1073/pnas.93.3.1232
 Bzowska A, Kulikowska E, Shugar D. Purine nucleoside phosphorylases: properties, functions, and clinical aspects. Pharmacol Ther. 2000 Dec;88(3):349–425. doi: 10.1016/s0163-7258(00)00097-8. PMID: 11337031.; Spychala J, Datta NS, Takabayashi K, Datta M, Fox IH, Gribbin T, Mitchell BS. Cloning of human adenosine kinase cDNA: sequence similarity to microbial ribokinases and fructokinases. Proc. Natl. Acad. Sci. U.S.A. 1996 Feb 06;93(3):1232–7. doi: 10.1073/pnas.93.3.1232.; Lewis AS, Lowy BA. Human erythrocyte purine nucleoside phosphorylase: molecular weight and physical properties. A Theorell-Chance catalytic mechanism. Journal of Biological Chemistry. 1979 Oct;254(19):9927–32. doi: 10.1016/s0021-9258(19)83606-2.
guanosine nucleotides degradation I

Accession ID: BioCyc:META_PWY-6607
  • 10.1074/jbc.m312929200
 Hesberg C, Hänsch R, Mendel RR, Bittner F. Tandem orientation of duplicated xanthine dehydrogenase genes from Arabidopsis thaliana: differential gene expression and enzyme activities. J Biol Chem. 2004 Apr 02;279(14):13547–54. doi: 10.1074/jbc.m312929200. PMID: 14726515.
guanine and guanosine salvage III

Accession ID: BioCyc:VCHO_PWY-6618		 -
guanine and guanosine salvage

Accession ID: BioCyc:VCHO_PWY-6620		 -
purine ribonucleosides degradation

Accession ID: BioCyc:SHIGELLA_PWY0-1296		 -
superpathway of guanine and guanosine salvage

Accession ID: BioCyc:SHIGELLA_PWY-6579		 -
guanine and guanosine salvage

Accession ID: BioCyc:MTBCDC1551_PWY-6620		 -
guanine and guanosine salvage

Accession ID: BioCyc:HPY_PWY-6620		 -
purine ribonucleosides degradation

Accession ID: BioCyc:ECOO157_PWY0-1296		 -
superpathway of guanine and guanosine salvage

Accession ID: BioCyc:ECOO157_PWY-6579		 -
superpathway of guanine and guanosine salvage

Accession ID: BioCyc:ECOL199310_PWY-6579		 -
guanosine nucleotides degradation III

Accession ID: BioCyc:ANTHRA_PWY-6608		 -
guanine and guanosine salvage

Accession ID: BioCyc:ANTHRA_PWY-6620		 -
purine nucleotides degradation II (aerobic)

Accession ID: BioCyc:AURANTIMONAS_PWY-6353		 -
salvage pathways of purine and pyrimidine nucleotides

Accession ID: BioCyc:SCO_P1-PWY		 -
guanosine nucleotides degradation II

Accession ID: BioCyc:SCO_PWY-6606
  • 10.1093/nar/28.1.27
 Kanehisa M, Goto S. KEGG: kyoto encyclopedia of genes and genomes. Nucleic Acids Res. 2000 Jan 01;28(1):27–30. PMID: 10592173; PMCID: PMC102409.
guanosine nucleotides degradation I

Accession ID: BioCyc:SCO_PWY-6607
  • 10.1093/nar/28.1.27
 Kanehisa M, Goto S. KEGG: kyoto encyclopedia of genes and genomes. Nucleic Acids Res. 2000 Jan 01;28(1):27–30. PMID: 10592173; PMCID: PMC102409.
guanosine nucleotides degradation III

Accession ID: BioCyc:BSUB_PWY-6608		 -