Pathways Knowlegdes

Biological pathway database

Pathway DOIs Note
itaconate biosynthesis

Accession ID: BioCyc:PCHR_PWY-5750		 -
TCA cycle, aerobic respiration

Accession ID: BioCyc:CALBI_PWY3B3-100
  • 10.1016/s0021-9258(19)50315-5
  • 10.1074/jbc.272.50.31382
  • 10.1074/jbc.m304091200
  • 10.1128/jb.84.4.778-783.1962
 Yasutake Y, Watanabe S, Yao M, Takada Y, Fukunaga N, Tanaka I. Crystal Structure of the Monomeric Isocitrate Dehydrogenase in the Presence of NADP+. Journal of Biological Chemistry. 2003 Sep;278(38):36897–904. doi: 10.1074/jbc.m304091200.; Oyedotun KS, Lemire BD. The Carboxyl Terminus of the Saccharomyces cerevisiaeSuccinate Dehydrogenase Membrane Subunit, SDH4p, Is Necessary for Ubiquinone Reduction and Enzyme Stability. Journal of Biological Chemistry. 1997 Dec;272(50):31382–8. doi: 10.1074/jbc.272.50.31382.; Haselbeck RJ, McAlister-Henn L. Function and expression of yeast mitochondrial NAD- and NADP-specific isocitrate dehydrogenases. Journal of Biological Chemistry. 1993 Jun;268(16):12116–22. doi: 10.1016/s0021-9258(19)50315-5.; RAO GR, SIRSI M, RAMAKRISHNAN T. Enzymes in Candida albicans. II. Tricarboxylic acid cycle and related enzymes. J Bacteriol. 1962 Oct;84():778–83. PMID: 13973046; PMCID: PMC277958.
mixed acid fermentation

Accession ID: BioCyc:PCHR_FERMENTATION-PWY		 -
respiration (anaerobic)

Accession ID: BioCyc:PCHR_ANARESP1-PWY		 -
TCA cycle variation III (eukaryotic)

Accession ID: BioCyc:PCHR_PWY-5690		 -
glyoxylate cycle

Accession ID: BioCyc:CALBI_GLYOXYLATE-BYPASS
  • 10.1038/35083594
  • 10.1046/j.1365-2958.2003.03396.x
  • 10.1046/j.1365-2958.2003.03412.x
  • 10.1111/j.1439-0507.2006.01192.x
  • 10.1111/j.1462-5822.2005.00676.x
  • 10.1128/ec.00372-06
  • 10.1128/ec.1.5.657-662.2002
  • 10.1247/csf.21.117
 Ramírez MA, Lorenz MC. Mutations in alternative carbon utilization pathways in Candida albicans attenuate virulence and confer pleiotropic phenotypes. Eukaryot Cell. 2007 Feb;6(2):280–90. PMID: 17158734; PMCID: PMC1797957.; Barelle CJ, Priest CL, MacCallum DM, Gow NAR, Odds FC, Brown AJP. Niche-specific regulation of central metabolic pathways in a fungal pathogen. Cell Microbiol. 2006 Jun;8(6):961–71. doi: 10.1111/j.1462-5822.2005.00676.x.; Lattif AA, Prasad R, Banerjee U, Gupta N, Mohammad S, Baquer NZ. The glyoxylate cycle enzyme activities in the pathogenic isolates of Candida albicans obtained from HIV/AIDS, diabetic and burn patients. Mycoses. 2006 Mar;49(2):85–90. doi: 10.1111/j.1439-0507.2006.01192.x. PMID: 16466439.; Fradin C, Kretschmar M, Nichterlein T, Gaillardin C, D’Enfert C, Hube B. Stage-specific gene expression of Candida albicans in human blood. Molecular Microbiology. 2003 Mar;47(6):1523–43. doi: 10.1046/j.1365-2958.2003.03396.x.; Wang ZY, Thornton CR, Kershaw MJ, Debao L, Talbot NJ. The glyoxylate cycle is required for temporal regulation of virulence by the plant pathogenic fungus Magnaporthe grisea. Mol Microbiol. 2003 Mar;47(6):1601–12. doi: 10.1046/j.1365-2958.2003.03412.x. PMID: 12622815.; Lorenz MC, Fink GR. Life and Death in a Macrophage: Role of the Glyoxylate Cycle in Virulence. Eukaryot Cell. 2002 Oct;1(5):657–62. doi: 10.1128/ec.1.5.657-662.2002.; Lorenz MC, Fink GR. The glyoxylate cycle is required for fungal virulence. Nature. 2001 Jul 05;412(6842):83–6. doi: 10.1038/35083594. PMID: 11452311.; Kamasawa N, Ohtsuka I, Kamada Y, Ueda M, Tanaka A, Osumi M. Immunoelectron microscopic observation of the behaviors of peroxisomal enzymes inducibly synthesized in an n-alkane-utilizable yeast cell, Candida tropicalis. Cell Struct Funct. 1996 Apr;21(2):117–22. doi: 10.1247/csf.21.117. PMID: 8790941.
TCA cycle variation III (eukaryotic)

Accession ID: BioCyc:SMAN_PWY-5690		 -
glyoxylate cycle

Accession ID: BioCyc:PCHR_GLYOXYLATE-BYPASS		 -
Central carbon metabolism

Accession ID: WikiPathways:WP3583
  • 10.1038/msb.2011.9
 2011; 7 477
TCA cycle (plant)

Accession ID: Plant Reactome:R-OGU-1119533
  • 10.1016/0003-9861(81)90297-6
  • 10.1016/j.tplants.2010.05.006
  • 10.1042/bj20100497
  • 10.1074/jbc.m109.097477
  • 10.1104/pp.59.4.630
  • 10.1111/j.1365-3040.2011.02332.x
  • 10.1146/annurev-arplant-042110-103857
 Araújo WL, Nunes-Nesi A, Nikoloski Z, Sweetlove LJ, Fernie AR. Metabolic control and regulation of the tricarboxylic acid cycle in photosynthetic and heterotrophic plant tissues. Plant Cell Environ. 2012 Jan;35(1):1–21. doi: 10.1111/j.1365-3040.2011.02332.x. PMID: 21477125.; Millar AH, Whelan J, Soole KL, Day DA. Organization and regulation of mitochondrial respiration in plants. Annu Rev Plant Biol. 2011;62():79–104. doi: 10.1146/annurev-arplant-042110-103857. PMID: 21332361.; Tronconi MA, Gerrard Wheeler MC, Maurino VG, Drincovich MF, Andreo CS. NAD-malic enzymes of Arabidopsis thaliana display distinct kinetic mechanisms that support differences in physiological control. Biochem J. 2010 Sep 01;430(2):295–303. doi: 10.1042/bj20100497. PMID: 20528775.; Sweetlove LJ, Beard KF, Nunes-Nesi A, Fernie AR, Ratcliffe RG. Not just a circle: flux modes in the plant TCA cycle. Trends Plant Sci. 2010 Aug;15(8):462–70. doi: 10.1016/j.tplants.2010.05.006. PMID: 20554469.; Tronconi MA, Maurino VG, Andreo CS, Drincovich MF. Three Different and Tissue-specific NAD-Malic Enzymes Generated by Alternative Subunit Association in Arabidopsis thaliana. Journal of Biological Chemistry. 2010 Apr;285(16):11870–9. doi: 10.1074/jbc.m109.097477.; Grover SD, Canellas PF, Wedding RT. Purification of NAD malic enzyme from potato and investigation of some physical and kinetic properties. Archives of Biochemistry and Biophysics. 1981 Jul;209(2):396–407. doi: 10.1016/0003-9861(81)90297-6.; Day DA, Hanson JB. Pyruvate and malate transport and oxidation in corn mitochondria. Plant Physiol. 1977 Apr;59(4):630–5. PMID: 16659908; PMCID: PMC542463.
TCA cycle (plant)

Accession ID: Plant Reactome:R-CCA-1119533
  • 10.1016/0003-9861(81)90297-6
  • 10.1016/j.tplants.2010.05.006
  • 10.1042/bj20100497
  • 10.1074/jbc.m109.097477
  • 10.1104/pp.59.4.630
  • 10.1111/j.1365-3040.2011.02332.x
  • 10.1146/annurev-arplant-042110-103857
 Araújo WL, Nunes-Nesi A, Nikoloski Z, Sweetlove LJ, Fernie AR. Metabolic control and regulation of the tricarboxylic acid cycle in photosynthetic and heterotrophic plant tissues. Plant Cell Environ. 2012 Jan;35(1):1–21. doi: 10.1111/j.1365-3040.2011.02332.x. PMID: 21477125.; Millar AH, Whelan J, Soole KL, Day DA. Organization and regulation of mitochondrial respiration in plants. Annu Rev Plant Biol. 2011;62():79–104. doi: 10.1146/annurev-arplant-042110-103857. PMID: 21332361.; Tronconi MA, Gerrard Wheeler MC, Maurino VG, Drincovich MF, Andreo CS. NAD-malic enzymes of Arabidopsis thaliana display distinct kinetic mechanisms that support differences in physiological control. Biochem J. 2010 Sep 01;430(2):295–303. doi: 10.1042/bj20100497. PMID: 20528775.; Sweetlove LJ, Beard KF, Nunes-Nesi A, Fernie AR, Ratcliffe RG. Not just a circle: flux modes in the plant TCA cycle. Trends Plant Sci. 2010 Aug;15(8):462–70. doi: 10.1016/j.tplants.2010.05.006. PMID: 20554469.; Tronconi MA, Maurino VG, Andreo CS, Drincovich MF. Three Different and Tissue-specific NAD-Malic Enzymes Generated by Alternative Subunit Association in Arabidopsis thaliana. Journal of Biological Chemistry. 2010 Apr;285(16):11870–9. doi: 10.1074/jbc.m109.097477.; Grover SD, Canellas PF, Wedding RT. Purification of NAD malic enzyme from potato and investigation of some physical and kinetic properties. Archives of Biochemistry and Biophysics. 1981 Jul;209(2):396–407. doi: 10.1016/0003-9861(81)90297-6.; Day DA, Hanson JB. Pyruvate and malate transport and oxidation in corn mitochondria. Plant Physiol. 1977 Apr;59(4):630–5. PMID: 16659908; PMCID: PMC542463.
TCA cycle (plant)

Accession ID: Plant Reactome:R-JCU-1119533
  • 10.1016/0003-9861(81)90297-6
  • 10.1016/j.tplants.2010.05.006
  • 10.1042/bj20100497
  • 10.1074/jbc.m109.097477
  • 10.1104/pp.59.4.630
  • 10.1111/j.1365-3040.2011.02332.x
  • 10.1146/annurev-arplant-042110-103857
 Araújo WL, Nunes-Nesi A, Nikoloski Z, Sweetlove LJ, Fernie AR. Metabolic control and regulation of the tricarboxylic acid cycle in photosynthetic and heterotrophic plant tissues. Plant Cell Environ. 2012 Jan;35(1):1–21. doi: 10.1111/j.1365-3040.2011.02332.x. PMID: 21477125.; Millar AH, Whelan J, Soole KL, Day DA. Organization and regulation of mitochondrial respiration in plants. Annu Rev Plant Biol. 2011;62():79–104. doi: 10.1146/annurev-arplant-042110-103857. PMID: 21332361.; Tronconi MA, Gerrard Wheeler MC, Maurino VG, Drincovich MF, Andreo CS. NAD-malic enzymes of Arabidopsis thaliana display distinct kinetic mechanisms that support differences in physiological control. Biochem J. 2010 Sep 01;430(2):295–303. doi: 10.1042/bj20100497. PMID: 20528775.; Sweetlove LJ, Beard KF, Nunes-Nesi A, Fernie AR, Ratcliffe RG. Not just a circle: flux modes in the plant TCA cycle. Trends Plant Sci. 2010 Aug;15(8):462–70. doi: 10.1016/j.tplants.2010.05.006. PMID: 20554469.; Tronconi MA, Maurino VG, Andreo CS, Drincovich MF. Three Different and Tissue-specific NAD-Malic Enzymes Generated by Alternative Subunit Association in Arabidopsis thaliana. Journal of Biological Chemistry. 2010 Apr;285(16):11870–9. doi: 10.1074/jbc.m109.097477.; Grover SD, Canellas PF, Wedding RT. Purification of NAD malic enzyme from potato and investigation of some physical and kinetic properties. Archives of Biochemistry and Biophysics. 1981 Jul;209(2):396–407. doi: 10.1016/0003-9861(81)90297-6.; Day DA, Hanson JB. Pyruvate and malate transport and oxidation in corn mitochondria. Plant Physiol. 1977 Apr;59(4):630–5. PMID: 16659908; PMCID: PMC542463.
TCA cycle (plant)

Accession ID: Plant Reactome:R-VAN-1119533
  • 10.1016/0003-9861(81)90297-6
  • 10.1016/j.tplants.2010.05.006
  • 10.1042/bj20100497
  • 10.1074/jbc.m109.097477
  • 10.1104/pp.59.4.630
  • 10.1111/j.1365-3040.2011.02332.x
  • 10.1146/annurev-arplant-042110-103857
 Araújo WL, Nunes-Nesi A, Nikoloski Z, Sweetlove LJ, Fernie AR. Metabolic control and regulation of the tricarboxylic acid cycle in photosynthetic and heterotrophic plant tissues. Plant Cell Environ. 2012 Jan;35(1):1–21. doi: 10.1111/j.1365-3040.2011.02332.x. PMID: 21477125.; Millar AH, Whelan J, Soole KL, Day DA. Organization and regulation of mitochondrial respiration in plants. Annu Rev Plant Biol. 2011;62():79–104. doi: 10.1146/annurev-arplant-042110-103857. PMID: 21332361.; Tronconi MA, Gerrard Wheeler MC, Maurino VG, Drincovich MF, Andreo CS. NAD-malic enzymes of Arabidopsis thaliana display distinct kinetic mechanisms that support differences in physiological control. Biochem J. 2010 Sep 01;430(2):295–303. doi: 10.1042/bj20100497. PMID: 20528775.; Sweetlove LJ, Beard KF, Nunes-Nesi A, Fernie AR, Ratcliffe RG. Not just a circle: flux modes in the plant TCA cycle. Trends Plant Sci. 2010 Aug;15(8):462–70. doi: 10.1016/j.tplants.2010.05.006. PMID: 20554469.; Tronconi MA, Maurino VG, Andreo CS, Drincovich MF. Three Different and Tissue-specific NAD-Malic Enzymes Generated by Alternative Subunit Association in Arabidopsis thaliana. Journal of Biological Chemistry. 2010 Apr;285(16):11870–9. doi: 10.1074/jbc.m109.097477.; Grover SD, Canellas PF, Wedding RT. Purification of NAD malic enzyme from potato and investigation of some physical and kinetic properties. Archives of Biochemistry and Biophysics. 1981 Jul;209(2):396–407. doi: 10.1016/0003-9861(81)90297-6.; Day DA, Hanson JB. Pyruvate and malate transport and oxidation in corn mitochondria. Plant Physiol. 1977 Apr;59(4):630–5. PMID: 16659908; PMCID: PMC542463.
TCA cycle (plant)

Accession ID: Plant Reactome:R-SLY-1119533
  • 10.1016/0003-9861(81)90297-6
  • 10.1016/j.tplants.2010.05.006
  • 10.1042/bj20100497
  • 10.1074/jbc.m109.097477
  • 10.1104/pp.59.4.630
  • 10.1111/j.1365-3040.2011.02332.x
  • 10.1146/annurev-arplant-042110-103857
 Araújo WL, Nunes-Nesi A, Nikoloski Z, Sweetlove LJ, Fernie AR. Metabolic control and regulation of the tricarboxylic acid cycle in photosynthetic and heterotrophic plant tissues. Plant Cell Environ. 2012 Jan;35(1):1–21. doi: 10.1111/j.1365-3040.2011.02332.x. PMID: 21477125.; Millar AH, Whelan J, Soole KL, Day DA. Organization and regulation of mitochondrial respiration in plants. Annu Rev Plant Biol. 2011;62():79–104. doi: 10.1146/annurev-arplant-042110-103857. PMID: 21332361.; Tronconi MA, Gerrard Wheeler MC, Maurino VG, Drincovich MF, Andreo CS. NAD-malic enzymes of Arabidopsis thaliana display distinct kinetic mechanisms that support differences in physiological control. Biochem J. 2010 Sep 01;430(2):295–303. doi: 10.1042/bj20100497. PMID: 20528775.; Sweetlove LJ, Beard KF, Nunes-Nesi A, Fernie AR, Ratcliffe RG. Not just a circle: flux modes in the plant TCA cycle. Trends Plant Sci. 2010 Aug;15(8):462–70. doi: 10.1016/j.tplants.2010.05.006. PMID: 20554469.; Tronconi MA, Maurino VG, Andreo CS, Drincovich MF. Three Different and Tissue-specific NAD-Malic Enzymes Generated by Alternative Subunit Association in Arabidopsis thaliana. Journal of Biological Chemistry. 2010 Apr;285(16):11870–9. doi: 10.1074/jbc.m109.097477.; Grover SD, Canellas PF, Wedding RT. Purification of NAD malic enzyme from potato and investigation of some physical and kinetic properties. Archives of Biochemistry and Biophysics. 1981 Jul;209(2):396–407. doi: 10.1016/0003-9861(81)90297-6.; Day DA, Hanson JB. Pyruvate and malate transport and oxidation in corn mitochondria. Plant Physiol. 1977 Apr;59(4):630–5. PMID: 16659908; PMCID: PMC542463.
TCA cycle (plant)

Accession ID: Plant Reactome:R-OGR-1119533
  • 10.1016/0003-9861(81)90297-6
  • 10.1016/j.tplants.2010.05.006
  • 10.1042/bj20100497
  • 10.1074/jbc.m109.097477
  • 10.1104/pp.59.4.630
  • 10.1111/j.1365-3040.2011.02332.x
  • 10.1146/annurev-arplant-042110-103857
 Araújo WL, Nunes-Nesi A, Nikoloski Z, Sweetlove LJ, Fernie AR. Metabolic control and regulation of the tricarboxylic acid cycle in photosynthetic and heterotrophic plant tissues. Plant Cell Environ. 2012 Jan;35(1):1–21. doi: 10.1111/j.1365-3040.2011.02332.x. PMID: 21477125.; Millar AH, Whelan J, Soole KL, Day DA. Organization and regulation of mitochondrial respiration in plants. Annu Rev Plant Biol. 2011;62():79–104. doi: 10.1146/annurev-arplant-042110-103857. PMID: 21332361.; Tronconi MA, Gerrard Wheeler MC, Maurino VG, Drincovich MF, Andreo CS. NAD-malic enzymes of Arabidopsis thaliana display distinct kinetic mechanisms that support differences in physiological control. Biochem J. 2010 Sep 01;430(2):295–303. doi: 10.1042/bj20100497. PMID: 20528775.; Sweetlove LJ, Beard KF, Nunes-Nesi A, Fernie AR, Ratcliffe RG. Not just a circle: flux modes in the plant TCA cycle. Trends Plant Sci. 2010 Aug;15(8):462–70. doi: 10.1016/j.tplants.2010.05.006. PMID: 20554469.; Tronconi MA, Maurino VG, Andreo CS, Drincovich MF. Three Different and Tissue-specific NAD-Malic Enzymes Generated by Alternative Subunit Association in Arabidopsis thaliana. Journal of Biological Chemistry. 2010 Apr;285(16):11870–9. doi: 10.1074/jbc.m109.097477.; Grover SD, Canellas PF, Wedding RT. Purification of NAD malic enzyme from potato and investigation of some physical and kinetic properties. Archives of Biochemistry and Biophysics. 1981 Jul;209(2):396–407. doi: 10.1016/0003-9861(81)90297-6.; Day DA, Hanson JB. Pyruvate and malate transport and oxidation in corn mitochondria. Plant Physiol. 1977 Apr;59(4):630–5. PMID: 16659908; PMCID: PMC542463.
TCA cycle (plant)

Accession ID: Plant Reactome:R-CAR-1119533
  • 10.1016/0003-9861(81)90297-6
  • 10.1016/j.tplants.2010.05.006
  • 10.1042/bj20100497
  • 10.1074/jbc.m109.097477
  • 10.1104/pp.59.4.630
  • 10.1111/j.1365-3040.2011.02332.x
  • 10.1146/annurev-arplant-042110-103857
 Araújo WL, Nunes-Nesi A, Nikoloski Z, Sweetlove LJ, Fernie AR. Metabolic control and regulation of the tricarboxylic acid cycle in photosynthetic and heterotrophic plant tissues. Plant Cell Environ. 2012 Jan;35(1):1–21. doi: 10.1111/j.1365-3040.2011.02332.x. PMID: 21477125.; Millar AH, Whelan J, Soole KL, Day DA. Organization and regulation of mitochondrial respiration in plants. Annu Rev Plant Biol. 2011;62():79–104. doi: 10.1146/annurev-arplant-042110-103857. PMID: 21332361.; Tronconi MA, Gerrard Wheeler MC, Maurino VG, Drincovich MF, Andreo CS. NAD-malic enzymes of Arabidopsis thaliana display distinct kinetic mechanisms that support differences in physiological control. Biochem J. 2010 Sep 01;430(2):295–303. doi: 10.1042/bj20100497. PMID: 20528775.; Sweetlove LJ, Beard KF, Nunes-Nesi A, Fernie AR, Ratcliffe RG. Not just a circle: flux modes in the plant TCA cycle. Trends Plant Sci. 2010 Aug;15(8):462–70. doi: 10.1016/j.tplants.2010.05.006. PMID: 20554469.; Tronconi MA, Maurino VG, Andreo CS, Drincovich MF. Three Different and Tissue-specific NAD-Malic Enzymes Generated by Alternative Subunit Association in Arabidopsis thaliana. Journal of Biological Chemistry. 2010 Apr;285(16):11870–9. doi: 10.1074/jbc.m109.097477.; Grover SD, Canellas PF, Wedding RT. Purification of NAD malic enzyme from potato and investigation of some physical and kinetic properties. Archives of Biochemistry and Biophysics. 1981 Jul;209(2):396–407. doi: 10.1016/0003-9861(81)90297-6.; Day DA, Hanson JB. Pyruvate and malate transport and oxidation in corn mitochondria. Plant Physiol. 1977 Apr;59(4):630–5. PMID: 16659908; PMCID: PMC542463.
TCA cycle (plant)

Accession ID: Plant Reactome:R-TPR-1119533
  • 10.1016/0003-9861(81)90297-6
  • 10.1016/j.tplants.2010.05.006
  • 10.1042/bj20100497
  • 10.1074/jbc.m109.097477
  • 10.1104/pp.59.4.630
  • 10.1111/j.1365-3040.2011.02332.x
  • 10.1146/annurev-arplant-042110-103857
 Araújo WL, Nunes-Nesi A, Nikoloski Z, Sweetlove LJ, Fernie AR. Metabolic control and regulation of the tricarboxylic acid cycle in photosynthetic and heterotrophic plant tissues. Plant Cell Environ. 2012 Jan;35(1):1–21. doi: 10.1111/j.1365-3040.2011.02332.x. PMID: 21477125.; Millar AH, Whelan J, Soole KL, Day DA. Organization and regulation of mitochondrial respiration in plants. Annu Rev Plant Biol. 2011;62():79–104. doi: 10.1146/annurev-arplant-042110-103857. PMID: 21332361.; Tronconi MA, Gerrard Wheeler MC, Maurino VG, Drincovich MF, Andreo CS. NAD-malic enzymes of Arabidopsis thaliana display distinct kinetic mechanisms that support differences in physiological control. Biochem J. 2010 Sep 01;430(2):295–303. doi: 10.1042/bj20100497. PMID: 20528775.; Sweetlove LJ, Beard KF, Nunes-Nesi A, Fernie AR, Ratcliffe RG. Not just a circle: flux modes in the plant TCA cycle. Trends Plant Sci. 2010 Aug;15(8):462–70. doi: 10.1016/j.tplants.2010.05.006. PMID: 20554469.; Tronconi MA, Maurino VG, Andreo CS, Drincovich MF. Three Different and Tissue-specific NAD-Malic Enzymes Generated by Alternative Subunit Association in Arabidopsis thaliana. Journal of Biological Chemistry. 2010 Apr;285(16):11870–9. doi: 10.1074/jbc.m109.097477.; Grover SD, Canellas PF, Wedding RT. Purification of NAD malic enzyme from potato and investigation of some physical and kinetic properties. Archives of Biochemistry and Biophysics. 1981 Jul;209(2):396–407. doi: 10.1016/0003-9861(81)90297-6.; Day DA, Hanson JB. Pyruvate and malate transport and oxidation in corn mitochondria. Plant Physiol. 1977 Apr;59(4):630–5. PMID: 16659908; PMCID: PMC542463.
TCA cycle (plant)

Accession ID: Plant Reactome:R-OBR-1119533
  • 10.1016/0003-9861(81)90297-6
  • 10.1016/j.tplants.2010.05.006
  • 10.1042/bj20100497
  • 10.1074/jbc.m109.097477
  • 10.1104/pp.59.4.630
  • 10.1111/j.1365-3040.2011.02332.x
  • 10.1146/annurev-arplant-042110-103857
 Araújo WL, Nunes-Nesi A, Nikoloski Z, Sweetlove LJ, Fernie AR. Metabolic control and regulation of the tricarboxylic acid cycle in photosynthetic and heterotrophic plant tissues. Plant Cell Environ. 2012 Jan;35(1):1–21. doi: 10.1111/j.1365-3040.2011.02332.x. PMID: 21477125.; Millar AH, Whelan J, Soole KL, Day DA. Organization and regulation of mitochondrial respiration in plants. Annu Rev Plant Biol. 2011;62():79–104. doi: 10.1146/annurev-arplant-042110-103857. PMID: 21332361.; Tronconi MA, Gerrard Wheeler MC, Maurino VG, Drincovich MF, Andreo CS. NAD-malic enzymes of Arabidopsis thaliana display distinct kinetic mechanisms that support differences in physiological control. Biochem J. 2010 Sep 01;430(2):295–303. doi: 10.1042/bj20100497. PMID: 20528775.; Sweetlove LJ, Beard KF, Nunes-Nesi A, Fernie AR, Ratcliffe RG. Not just a circle: flux modes in the plant TCA cycle. Trends Plant Sci. 2010 Aug;15(8):462–70. doi: 10.1016/j.tplants.2010.05.006. PMID: 20554469.; Tronconi MA, Maurino VG, Andreo CS, Drincovich MF. Three Different and Tissue-specific NAD-Malic Enzymes Generated by Alternative Subunit Association in Arabidopsis thaliana. Journal of Biological Chemistry. 2010 Apr;285(16):11870–9. doi: 10.1074/jbc.m109.097477.; Grover SD, Canellas PF, Wedding RT. Purification of NAD malic enzyme from potato and investigation of some physical and kinetic properties. Archives of Biochemistry and Biophysics. 1981 Jul;209(2):396–407. doi: 10.1016/0003-9861(81)90297-6.; Day DA, Hanson JB. Pyruvate and malate transport and oxidation in corn mitochondria. Plant Physiol. 1977 Apr;59(4):630–5. PMID: 16659908; PMCID: PMC542463.
TCA cycle (plant)

Accession ID: Plant Reactome:R-PHH-1119533
  • 10.1016/0003-9861(81)90297-6
  • 10.1016/j.tplants.2010.05.006
  • 10.1042/bj20100497
  • 10.1074/jbc.m109.097477
  • 10.1104/pp.59.4.630
  • 10.1111/j.1365-3040.2011.02332.x
  • 10.1146/annurev-arplant-042110-103857
 Araújo WL, Nunes-Nesi A, Nikoloski Z, Sweetlove LJ, Fernie AR. Metabolic control and regulation of the tricarboxylic acid cycle in photosynthetic and heterotrophic plant tissues. Plant Cell Environ. 2012 Jan;35(1):1–21. doi: 10.1111/j.1365-3040.2011.02332.x. PMID: 21477125.; Millar AH, Whelan J, Soole KL, Day DA. Organization and regulation of mitochondrial respiration in plants. Annu Rev Plant Biol. 2011;62():79–104. doi: 10.1146/annurev-arplant-042110-103857. PMID: 21332361.; Tronconi MA, Gerrard Wheeler MC, Maurino VG, Drincovich MF, Andreo CS. NAD-malic enzymes of Arabidopsis thaliana display distinct kinetic mechanisms that support differences in physiological control. Biochem J. 2010 Sep 01;430(2):295–303. doi: 10.1042/bj20100497. PMID: 20528775.; Sweetlove LJ, Beard KF, Nunes-Nesi A, Fernie AR, Ratcliffe RG. Not just a circle: flux modes in the plant TCA cycle. Trends Plant Sci. 2010 Aug;15(8):462–70. doi: 10.1016/j.tplants.2010.05.006. PMID: 20554469.; Tronconi MA, Maurino VG, Andreo CS, Drincovich MF. Three Different and Tissue-specific NAD-Malic Enzymes Generated by Alternative Subunit Association in Arabidopsis thaliana. Journal of Biological Chemistry. 2010 Apr;285(16):11870–9. doi: 10.1074/jbc.m109.097477.; Grover SD, Canellas PF, Wedding RT. Purification of NAD malic enzyme from potato and investigation of some physical and kinetic properties. Archives of Biochemistry and Biophysics. 1981 Jul;209(2):396–407. doi: 10.1016/0003-9861(81)90297-6.; Day DA, Hanson JB. Pyruvate and malate transport and oxidation in corn mitochondria. Plant Physiol. 1977 Apr;59(4):630–5. PMID: 16659908; PMCID: PMC542463.
TCA cycle (plant)

Accession ID: Plant Reactome:R-OAU-1119533
  • 10.1016/0003-9861(81)90297-6
  • 10.1016/j.tplants.2010.05.006
  • 10.1042/bj20100497
  • 10.1074/jbc.m109.097477
  • 10.1104/pp.59.4.630
  • 10.1111/j.1365-3040.2011.02332.x
  • 10.1146/annurev-arplant-042110-103857
 Araújo WL, Nunes-Nesi A, Nikoloski Z, Sweetlove LJ, Fernie AR. Metabolic control and regulation of the tricarboxylic acid cycle in photosynthetic and heterotrophic plant tissues. Plant Cell Environ. 2012 Jan;35(1):1–21. doi: 10.1111/j.1365-3040.2011.02332.x. PMID: 21477125.; Millar AH, Whelan J, Soole KL, Day DA. Organization and regulation of mitochondrial respiration in plants. Annu Rev Plant Biol. 2011;62():79–104. doi: 10.1146/annurev-arplant-042110-103857. PMID: 21332361.; Tronconi MA, Gerrard Wheeler MC, Maurino VG, Drincovich MF, Andreo CS. NAD-malic enzymes of Arabidopsis thaliana display distinct kinetic mechanisms that support differences in physiological control. Biochem J. 2010 Sep 01;430(2):295–303. doi: 10.1042/bj20100497. PMID: 20528775.; Sweetlove LJ, Beard KF, Nunes-Nesi A, Fernie AR, Ratcliffe RG. Not just a circle: flux modes in the plant TCA cycle. Trends Plant Sci. 2010 Aug;15(8):462–70. doi: 10.1016/j.tplants.2010.05.006. PMID: 20554469.; Tronconi MA, Maurino VG, Andreo CS, Drincovich MF. Three Different and Tissue-specific NAD-Malic Enzymes Generated by Alternative Subunit Association in Arabidopsis thaliana. Journal of Biological Chemistry. 2010 Apr;285(16):11870–9. doi: 10.1074/jbc.m109.097477.; Grover SD, Canellas PF, Wedding RT. Purification of NAD malic enzyme from potato and investigation of some physical and kinetic properties. Archives of Biochemistry and Biophysics. 1981 Jul;209(2):396–407. doi: 10.1016/0003-9861(81)90297-6.; Day DA, Hanson JB. Pyruvate and malate transport and oxidation in corn mitochondria. Plant Physiol. 1977 Apr;59(4):630–5. PMID: 16659908; PMCID: PMC542463.