Pathways Knowlegdes
Biological pathway database
| Pathway | DOIs | Note |
|---|---|---|
| Amino acid biosynthesis Accession ID: Plant Reactome:R-FVE-5655122 |
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| Asparagine biosynthesis I Accession ID: Plant Reactome:R-FVE-1119553 |
|
de la Torre F, Canas RA, Pascual MB, Avila C, Canovas FM. Plastidic aspartate aminotransferases and the biosynthesis of essential amino acids in plants. Journal of Experimental Botany. 2014 Jun 05;65(19):5527–34. doi: 10.1093/jxb/eru240.; Xia J, Yamaji N, Che J, Shen RF, Ma JF. Normal root elongation requires arginine produced by argininosuccinate lyase in rice. Plant J. 2014 Apr;78(2):215–26. doi: 10.1111/tpj.12476. PMID: 24528386.; Gaufichon L, Masclaux-Daubresse C, Tcherkez G, Reisdorf-Cren M, Sakakibara Y, Hase T, Clément G, Avice JC, Grandjean O, Marmagne A, Boutet-Mercey S, Azzopardi M, Soulay F, Suzuki A. Arabidopsis thaliana ASN2 encoding asparagine synthetase is involved in the control of nitrogen assimilation and export during vegetative growth. Plant Cell Environ. 2013 Feb;36(2):328–42. doi: 10.1111/j.1365-3040.2012.02576.x. PMID: 22789031. |
| NAD biosynthesis I (from aspartate) Accession ID: Plant Reactome:R-FVE-1119384 |
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| Fatty acid activation Accession ID: Plant Reactome:R-FVE-1119623 |
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| PRPP biosynthesis I Accession ID: Plant Reactome:R-FVE-1119278 |
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| Metabolism and regulation Accession ID: Plant Reactome:R-MES-2744345 |
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| Amino acid metabolism Accession ID: Plant Reactome:R-MES-2744343 |
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| Asparagine biosynthesis I Accession ID: Plant Reactome:R-MES-1119553 |
|
de la Torre F, Canas RA, Pascual MB, Avila C, Canovas FM. Plastidic aspartate aminotransferases and the biosynthesis of essential amino acids in plants. Journal of Experimental Botany. 2014 Jun 05;65(19):5527–34. doi: 10.1093/jxb/eru240.; Xia J, Yamaji N, Che J, Shen RF, Ma JF. Normal root elongation requires arginine produced by argininosuccinate lyase in rice. Plant J. 2014 Apr;78(2):215–26. doi: 10.1111/tpj.12476. PMID: 24528386.; Gaufichon L, Masclaux-Daubresse C, Tcherkez G, Reisdorf-Cren M, Sakakibara Y, Hase T, Clément G, Avice JC, Grandjean O, Marmagne A, Boutet-Mercey S, Azzopardi M, Soulay F, Suzuki A. Arabidopsis thaliana ASN2 encoding asparagine synthetase is involved in the control of nitrogen assimilation and export during vegetative growth. Plant Cell Environ. 2013 Feb;36(2):328–42. doi: 10.1111/j.1365-3040.2012.02576.x. PMID: 22789031. |
| Cofactor biosyntheses Accession ID: Plant Reactome:R-MES-2867929 |
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| Folate biosynthesis Accession ID: Plant Reactome:R-MES-1119265 |
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| Hormone signaling, transport, and metabolism Accession ID: Plant Reactome:R-MES-2744341 |
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| Metabolism and regulation Accession ID: Plant Reactome:R-TDI-2744345 |
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| Amino acid metabolism Accession ID: Plant Reactome:R-TDI-2744343 |
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| Canavanine biosynthesis Accession ID: Plant Reactome:R-TDI-1119444 |
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| NAD biosynthesis I (from aspartate) Accession ID: Plant Reactome:R-TDI-1119384 |
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| Suberin biosynthesis Accession ID: Plant Reactome:R-TDI-1119418 |
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| Fatty acid and lipid metabolism Accession ID: Plant Reactome:R-TDI-3906998 |
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| Nucleotide metabolism Accession ID: Plant Reactome:R-TDI-5655149 |
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| Metabolism and regulation Accession ID: Plant Reactome:R-DRO-2744345 |
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| Citrulline-nitric oxide cycle Accession ID: Plant Reactome:R-DRO-5633340 |
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Gupta KJ, Fernie AR, Kaiser WM, van Dongen JT. On the origins of nitric oxide. Trends Plant Sci. 2011 Mar;16(3):160–8. doi: 10.1016/j.tplants.2010.11.007. PMID: 21185769.; Foresi N, Correa-Aragunde N, Parisi G, Caló G, Salerno G, Lamattina L. Characterization of a nitric oxide synthase from the plant kingdom: NO generation from the green alga Ostreococcus tauri is light irradiance and growth phase dependent. Plant Cell. 2010 Nov;22(11):3816–30. PMID: 21119059; PMCID: PMC3015112. |