Pathways Knowlegdes

Biological pathway database


Pathway DOIs Note
Metabolism and regulation

Accession ID: Plant Reactome:R-PTI-2744345
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Amino acid metabolism

Accession ID: Plant Reactome:R-PTI-2744343
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Asparagine biosynthesis I

Accession ID: Plant Reactome:R-PTI-1119553
  • 10.1093/jxb/eru240
  • 10.1111/j.1365-3040.2012.02576.x
  • 10.1111/tpj.12476
de la Torre F, Canas RA, Pascual MB, Avila C, Canovas FM. Plastidic aspartate aminotransferases and the biosynthesis of essential amino acids in plants. Journal of Experimental Botany. 2014 Jun 05;65(19):5527–34. doi: 10.1093/jxb/eru240.; Xia J, Yamaji N, Che J, Shen RF, Ma JF. Normal root elongation requires arginine produced by argininosuccinate lyase in rice. Plant J. 2014 Apr;78(2):215–26. doi: 10.1111/tpj.12476. PMID: 24528386.; Gaufichon L, Masclaux-Daubresse C, Tcherkez G, Reisdorf-Cren M, Sakakibara Y, Hase T, Clément G, Avice JC, Grandjean O, Marmagne A, Boutet-Mercey S, Azzopardi M, Soulay F, Suzuki A. Arabidopsis thaliana ASN2 encoding asparagine synthetase is involved in the control of nitrogen assimilation and export during vegetative growth. Plant Cell Environ. 2013 Feb;36(2):328–42. doi: 10.1111/j.1365-3040.2012.02576.x. PMID: 22789031.
Cofactor biosyntheses

Accession ID: Plant Reactome:R-PTI-2867929
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Folate biosynthesis

Accession ID: Plant Reactome:R-PTI-1119265
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Hormone signaling, transport, and metabolism

Accession ID: Plant Reactome:R-PTI-2744341
-
Metabolism and regulation

Accession ID: Plant Reactome:R-GMA-2744345
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Amino acid metabolism

Accession ID: Plant Reactome:R-GMA-2744343
-
Canavanine biosynthesis

Accession ID: Plant Reactome:R-GMA-1119444
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NAD biosynthesis I (from aspartate)

Accession ID: Plant Reactome:R-GMA-1119384
-
Secondary metabolism

Accession ID: Plant Reactome:R-GMA-2744344
-
Metabolism and regulation

Accession ID: Plant Reactome:R-PDA-2744345
-
Amino acid metabolism

Accession ID: Plant Reactome:R-PDA-2744343
-
Asparagine biosynthesis I

Accession ID: Plant Reactome:R-PDA-1119553
  • 10.1093/jxb/eru240
  • 10.1111/j.1365-3040.2012.02576.x
  • 10.1111/tpj.12476
de la Torre F, Canas RA, Pascual MB, Avila C, Canovas FM. Plastidic aspartate aminotransferases and the biosynthesis of essential amino acids in plants. Journal of Experimental Botany. 2014 Jun 05;65(19):5527–34. doi: 10.1093/jxb/eru240.; Xia J, Yamaji N, Che J, Shen RF, Ma JF. Normal root elongation requires arginine produced by argininosuccinate lyase in rice. Plant J. 2014 Apr;78(2):215–26. doi: 10.1111/tpj.12476. PMID: 24528386.; Gaufichon L, Masclaux-Daubresse C, Tcherkez G, Reisdorf-Cren M, Sakakibara Y, Hase T, Clément G, Avice JC, Grandjean O, Marmagne A, Boutet-Mercey S, Azzopardi M, Soulay F, Suzuki A. Arabidopsis thaliana ASN2 encoding asparagine synthetase is involved in the control of nitrogen assimilation and export during vegetative growth. Plant Cell Environ. 2013 Feb;36(2):328–42. doi: 10.1111/j.1365-3040.2012.02576.x. PMID: 22789031.
Pantothenate biosynthesis II

Accession ID: Plant Reactome:R-PDA-1119544
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Metabolism and regulation

Accession ID: Plant Reactome:R-PVU-2744345
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Amino acid metabolism

Accession ID: Plant Reactome:R-PVU-2744343
-
Canavanine biosynthesis

Accession ID: Plant Reactome:R-PVU-1119444
-
NAD biosynthesis I (from aspartate)

Accession ID: Plant Reactome:R-PVU-1119384
-
Suberin biosynthesis

Accession ID: Plant Reactome:R-PVU-1119418
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