Pathways Knowlegdes

Biological pathway database

Pathway DOIs Note
bisabolene biosynthesis (engineered)

Accession ID: BioCyc:META_PWY-7102
  • 10.1073/pnas.95.12.6756
 Bohlmann J, Crock J, Jetter R, Croteau R. Terpenoid-based defenses in conifers: cDNA cloning, characterization, and functional expression of wound-inducible ( E )-a-bisabolene synthase from grand fir ( Abies grandis ). Proc. Natl. Acad. Sci. U.S.A. 1998 Jun 09;95(12):6756–61. doi: 10.1073/pnas.95.12.6756.
santalene biosynthesis II

Accession ID: BioCyc:META_PWY-6836
  • 10.1016/j.abb.2007.06.011
  • 10.1073/pnas.0508027103
  • 10.1074/jbc.m111.231787
 Jones CG, Moniodis J, Zulak KG, Scaffidi A, Plummer JA, Ghisalberti EL, Barbour EL, Bohlmann J. Sandalwood Fragrance Biosynthesis Involves Sesquiterpene Synthases of Both the Terpene Synthase (TPS)-a and TPS-b Subfamilies, including Santalene Synthases. Journal of Biological Chemistry. 2011 May;286(20):17445–54. doi: 10.1074/jbc.m111.231787.; Landmann C, Fink B, Festner M, Dregus M, Engel KH, Schwab W. Cloning and functional characterization of three terpene synthases from lavender (Lavandula angustifolia). Arch Biochem Biophys. 2007 Sep 15;465(2):417–29. doi: 10.1016/j.abb.2007.06.011. PMID: 17662687.; Schnee C, Köllner TG, Held M, Turlings TCJ, Gershenzon J, Degenhardt J. The products of a single maize sesquiterpene synthase form a volatile defense signal that attracts natural enemies of maize herbivores. Proc. Natl. Acad. Sci. U.S.A. 2006 Jan 17;103(4):1129–34. doi: 10.1073/pnas.0508027103.
zealexin biosynthesis

Accession ID: BioCyc:META_PWY-6888
  • 10.1104/pp.111.179457
 Huffaker A, Kaplan F, Vaughan MM, Dafoe NJ, Ni X, Rocca JR, Alborn HT, Teal PE, Schmelz EA. Novel acidic sesquiterpenoids constitute a dominant class of pathogen-induced phytoalexins in maize. Plant Physiol. 2011 Aug;156(4):2082–97. PMID: 21690302; PMCID: PMC3149930.
zealexin biosynthesis

Accession ID: PlantCyc:AMBORELLA_PWY-6888		 -
zealexin biosynthesis

Accession ID: PlantCyc:WHEATD_PWY-6888		 -
santalene biosynthesis II

Accession ID: PlantCyc:PLANT_PWY-6836
  • 10.1016/j.abb.2007.06.011
  • 10.1073/pnas.0508027103
  • 10.1074/jbc.m111.231787
 Jones CG, Moniodis J, Zulak KG, Scaffidi A, Plummer JA, Ghisalberti EL, Barbour EL, Bohlmann J. Sandalwood Fragrance Biosynthesis Involves Sesquiterpene Synthases of Both the Terpene Synthase (TPS)-a and TPS-b Subfamilies, including Santalene Synthases. Journal of Biological Chemistry. 2011 May;286(20):17445–54. doi: 10.1074/jbc.m111.231787.; Landmann C, Fink B, Festner M, Dregus M, Engel KH, Schwab W. Cloning and functional characterization of three terpene synthases from lavender (Lavandula angustifolia). Arch Biochem Biophys. 2007 Sep 15;465(2):417–29. doi: 10.1016/j.abb.2007.06.011. PMID: 17662687.; Schnee C, Köllner TG, Held M, Turlings TCJ, Gershenzon J, Degenhardt J. The products of a single maize sesquiterpene synthase form a volatile defense signal that attracts natural enemies of maize herbivores. Proc. Natl. Acad. Sci. U.S.A. 2006 Jan 17;103(4):1129–34. doi: 10.1073/pnas.0508027103.
bisabolene biosynthesis (engineered)

Accession ID: PlantCyc:PLANT_PWY-7102
  • 10.1073/pnas.95.12.6756
 Bohlmann J, Crock J, Jetter R, Croteau R. Terpenoid-based defenses in conifers: cDNA cloning, characterization, and functional expression of wound-inducible ( E )-a-bisabolene synthase from grand fir ( Abies grandis ). Proc. Natl. Acad. Sci. U.S.A. 1998 Jun 09;95(12):6756–61. doi: 10.1073/pnas.95.12.6756.
zealexin biosynthesis

Accession ID: PlantCyc:SETARIA_PWY-6888		 -
zealexin biosynthesis

Accession ID: PlantCyc:BRACHYPODIUM_PWY-6888		 -
zealexin biosynthesis

Accession ID: PlantCyc:BREADWHEAT_PWY-6888		 -
zealexin biosynthesis

Accession ID: PlantCyc:PLANT_PWY-6888
  • 10.1104/pp.111.179457
 Huffaker A, Kaplan F, Vaughan MM, Dafoe NJ, Ni X, Rocca JR, Alborn HT, Teal PE, Schmelz EA. Novel acidic sesquiterpenoids constitute a dominant class of pathogen-induced phytoalexins in maize. Plant Physiol. 2011 Aug;156(4):2082–97. PMID: 21690302; PMCID: PMC3149930.
zealexin biosynthesis

Accession ID: PlantCyc:SVIRIDIS_PWY-6888		 -
zealexin biosynthesis

Accession ID: PlantCyc:SWITCHGRASS_PWY-6888		 -
zealexin biosynthesis

Accession ID: PlantCyc:MSINENSIS_PWY-6888		 -
zealexin biosynthesis

Accession ID: PlantCyc:OTHOMAEUM_PWY-6888		 -
zealexin biosynthesis

Accession ID: PlantCyc:CORN_PWY-6888
  • 10.1104/pp.111.179457
 Huffaker A, Kaplan F, Vaughan MM, Dafoe NJ, Ni X, Rocca JR, Alborn HT, Teal PE, Schmelz EA. Novel acidic sesquiterpenoids constitute a dominant class of pathogen-induced phytoalexins in maize. Plant Physiol. 2011 Aug;156(4):2082–97. PMID: 21690302; PMCID: PMC3149930.
zealexin biosynthesis

Accession ID: PlantCyc:PHALLII_PWY-6888		 -
zealexin biosynthesis

Accession ID: PlantCyc:WILDSUGARCANE_PWY-6888		 -
zealexin biosynthesis

Accession ID: PlantCyc:WHEATA_PWY-6888		 -