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Pathways Knowlegdes

Biological pathway database

Pathway	DOIs	Note
abietic acid biosynthesis Accession ID: BioCyc:META_PWY-5411	`10.1073/pnas.0500825102` `10.1074/jbc.271.38.23262` `10.1146/annurev.arplant.52.1.689`	Ro D, Arimura G, Lau SYW, Piers E, Bohlmann J. Loblolly pine abietadienol/abietadienal oxidase PtAO (CYP720B1) is a multifunctional, multisubstrate cytochrome P450 monooxygenase. Proc. Natl. Acad. Sci. U.S.A. 2005 May 23;102(22):8060–5. doi: 10.1073/pnas.0500825102.; Trapp S, Croteau R. DEFENSIVE RESIN BIOSYNTHESIS IN CONIFERS. Annu. Rev. Plant. Physiol. Plant. Mol. Biol. 2001 Jun;52(1):689–724. doi: 10.1146/annurev.arplant.52.1.689.; Vogel BS, Wildung MR, Vogel G, Croteau R. Abietadiene synthase from grand fir (Abies grandis). cDNA isolation, characterization, and bacterial expression of a bifunctional diterpene cyclase involved in resin acid biosynthesis. J Biol Chem. 1996 Sep 20;271(38):23262–8. doi: 10.1074/jbc.271.38.23262. PMID: 8798524.
superpathway of diterpene resin acids biosynthesis Accession ID: BioCyc:META_PWY-5416	`10.1073/pnas.0500825102` `10.1146/annurev.arplant.52.1.689`	Ro D, Arimura G, Lau SYW, Piers E, Bohlmann J. Loblolly pine abietadienol/abietadienal oxidase PtAO (CYP720B1) is a multifunctional, multisubstrate cytochrome P450 monooxygenase. Proc. Natl. Acad. Sci. U.S.A. 2005 May 23;102(22):8060–5. doi: 10.1073/pnas.0500825102.; Trapp S, Croteau R. DEFENSIVE RESIN BIOSYNTHESIS IN CONIFERS. Annu. Rev. Plant. Physiol. Plant. Mol. Biol. 2001 Jun;52(1):689–724. doi: 10.1146/annurev.arplant.52.1.689.
dehydroabietic acid biosynthesis Accession ID: BioCyc:META_PWY-5421	`10.1006/abbi.1994.1370` `10.1007/s10886-006-9191-z` `10.1016/j.phytochem.2006.01.011` `10.1073/pnas.0500825102` `10.1093/treephys/20.16.1087` `10.1146/annurev.arplant.52.1.689`	Kersten PJ, Kopper BJ, Raffa KF, Illman BL. Rapid Analysis of Abietanes in Conifers. Journal of Chemical Ecology. 2006 Nov 03;32(12):2679–85. doi: 10.1007/s10886-006-9191-z.; Ro DK, Bohlmann J. Diterpene resin acid biosynthesis in loblolly pine (Pinus taeda): functional characterization of abietadiene/levopimaradiene synthase (PtTPS-LAS) cDNA and subcellular targeting of PtTPS-LAS and abietadienol/abietadienal oxidase (PtAO, CYP720B1). Phytochemistry. 2006 Aug;67(15):1572–8. doi: 10.1016/j.phytochem.2006.01.011. PMID: 16497345.; Ro D, Arimura G, Lau SYW, Piers E, Bohlmann J. Loblolly pine abietadienol/abietadienal oxidase PtAO (CYP720B1) is a multifunctional, multisubstrate cytochrome P450 monooxygenase. Proc. Natl. Acad. Sci. U.S.A. 2005 May 23;102(22):8060–5. doi: 10.1073/pnas.0500825102.; Trapp S, Croteau R. DEFENSIVE RESIN BIOSYNTHESIS IN CONIFERS. Annu. Rev. Plant. Physiol. Plant. Mol. Biol. 2001 Jun;52(1):689–724. doi: 10.1146/annurev.arplant.52.1.689.; Tomlin ES, Antonejevic E, Alfaro RI, Borden JH. Changes in volatile terpene and diterpene resin acid composition of resistant and susceptible white spruce leaders exposed to simulated white pine weevil damage. Tree Physiol. 2000 Oct;20(16):1087–95. doi: 10.1093/treephys/20.16.1087. PMID: 11269960.; Lafever RE, Vogel BS, Croteau R. Diterpenoid Resin Acid Biosynthesis in Conifers: Enzymatic Cyclization of Geranylgeranyl Pyrophosphate to Abietadiene, the Precursor of Abietic Acid. Archives of Biochemistry and Biophysics. 1994 Aug;313(1):139–49. doi: 10.1006/abbi.1994.1370.
dehydroabietic acid biosynthesis Accession ID: PlantCyc:PLANT_PWY-5421	`10.1006/abbi.1994.1370` `10.1007/s10886-006-9191-z` `10.1016/j.phytochem.2006.01.011` `10.1073/pnas.0500825102` `10.1093/treephys/20.16.1087` `10.1146/annurev.arplant.52.1.689`	Kersten PJ, Kopper BJ, Raffa KF, Illman BL. Rapid Analysis of Abietanes in Conifers. Journal of Chemical Ecology. 2006 Nov 03;32(12):2679–85. doi: 10.1007/s10886-006-9191-z.; Ro DK, Bohlmann J. Diterpene resin acid biosynthesis in loblolly pine (Pinus taeda): functional characterization of abietadiene/levopimaradiene synthase (PtTPS-LAS) cDNA and subcellular targeting of PtTPS-LAS and abietadienol/abietadienal oxidase (PtAO, CYP720B1). Phytochemistry. 2006 Aug;67(15):1572–8. doi: 10.1016/j.phytochem.2006.01.011. PMID: 16497345.; Ro D, Arimura G, Lau SYW, Piers E, Bohlmann J. Loblolly pine abietadienol/abietadienal oxidase PtAO (CYP720B1) is a multifunctional, multisubstrate cytochrome P450 monooxygenase. Proc. Natl. Acad. Sci. U.S.A. 2005 May 23;102(22):8060–5. doi: 10.1073/pnas.0500825102.; Trapp S, Croteau R. DEFENSIVE RESIN BIOSYNTHESIS IN CONIFERS. Annu. Rev. Plant. Physiol. Plant. Mol. Biol. 2001 Jun;52(1):689–724. doi: 10.1146/annurev.arplant.52.1.689.; Tomlin ES, Antonejevic E, Alfaro RI, Borden JH. Changes in volatile terpene and diterpene resin acid composition of resistant and susceptible white spruce leaders exposed to simulated white pine weevil damage. Tree Physiol. 2000 Oct;20(16):1087–95. doi: 10.1093/treephys/20.16.1087. PMID: 11269960.; Lafever RE, Vogel BS, Croteau R. Diterpenoid Resin Acid Biosynthesis in Conifers: Enzymatic Cyclization of Geranylgeranyl Pyrophosphate to Abietadiene, the Precursor of Abietic Acid. Archives of Biochemistry and Biophysics. 1994 Aug;313(1):139–49. doi: 10.1006/abbi.1994.1370.
abietic acid biosynthesis Accession ID: PlantCyc:PLANT_PWY-5411	`10.1006/abbi.1994.1370` `10.1007/s10886-006-9191-z` `10.1016/j.phytochem.2006.01.011` `10.1073/pnas.0500825102` `10.1074/jbc.271.38.23262` `10.1093/treephys/20.16.1087` `10.1146/annurev.arplant.52.1.689`	Kersten PJ, Kopper BJ, Raffa KF, Illman BL. Rapid Analysis of Abietanes in Conifers. Journal of Chemical Ecology. 2006 Nov 03;32(12):2679–85. doi: 10.1007/s10886-006-9191-z.; Ro DK, Bohlmann J. Diterpene resin acid biosynthesis in loblolly pine (Pinus taeda): functional characterization of abietadiene/levopimaradiene synthase (PtTPS-LAS) cDNA and subcellular targeting of PtTPS-LAS and abietadienol/abietadienal oxidase (PtAO, CYP720B1). Phytochemistry. 2006 Aug;67(15):1572–8. doi: 10.1016/j.phytochem.2006.01.011. PMID: 16497345.; Ro D, Arimura G, Lau SYW, Piers E, Bohlmann J. Loblolly pine abietadienol/abietadienal oxidase PtAO (CYP720B1) is a multifunctional, multisubstrate cytochrome P450 monooxygenase. Proc. Natl. Acad. Sci. U.S.A. 2005 May 23;102(22):8060–5. doi: 10.1073/pnas.0500825102.; Trapp S, Croteau R. DEFENSIVE RESIN BIOSYNTHESIS IN CONIFERS. Annu. Rev. Plant. Physiol. Plant. Mol. Biol. 2001 Jun;52(1):689–724. doi: 10.1146/annurev.arplant.52.1.689.; Tomlin ES, Antonejevic E, Alfaro RI, Borden JH. Changes in volatile terpene and diterpene resin acid composition of resistant and susceptible white spruce leaders exposed to simulated white pine weevil damage. Tree Physiol. 2000 Oct;20(16):1087–95. doi: 10.1093/treephys/20.16.1087. PMID: 11269960.; Vogel BS, Wildung MR, Vogel G, Croteau R. Abietadiene synthase from grand fir (Abies grandis). cDNA isolation, characterization, and bacterial expression of a bifunctional diterpene cyclase involved in resin acid biosynthesis. J Biol Chem. 1996 Sep 20;271(38):23262–8. doi: 10.1074/jbc.271.38.23262. PMID: 8798524.; Lafever RE, Vogel BS, Croteau R. Diterpenoid Resin Acid Biosynthesis in Conifers: Enzymatic Cyclization of Geranylgeranyl Pyrophosphate to Abietadiene, the Precursor of Abietic Acid. Archives of Biochemistry and Biophysics. 1994 Aug;313(1):139–49. doi: 10.1006/abbi.1994.1370.
superpathway of diterpene resin acids biosynthesis Accession ID: PlantCyc:PLANT_PWY-5416	`10.1006/abbi.1994.1370` `10.1007/s10886-006-9191-z` `10.1016/j.phytochem.2006.01.011` `10.1073/pnas.0500825102` `10.1093/treephys/20.16.1087` `10.1146/annurev.arplant.52.1.689`	Kersten PJ, Kopper BJ, Raffa KF, Illman BL. Rapid Analysis of Abietanes in Conifers. Journal of Chemical Ecology. 2006 Nov 03;32(12):2679–85. doi: 10.1007/s10886-006-9191-z.; Ro DK, Bohlmann J. Diterpene resin acid biosynthesis in loblolly pine (Pinus taeda): functional characterization of abietadiene/levopimaradiene synthase (PtTPS-LAS) cDNA and subcellular targeting of PtTPS-LAS and abietadienol/abietadienal oxidase (PtAO, CYP720B1). Phytochemistry. 2006 Aug;67(15):1572–8. doi: 10.1016/j.phytochem.2006.01.011. PMID: 16497345.; Ro D, Arimura G, Lau SYW, Piers E, Bohlmann J. Loblolly pine abietadienol/abietadienal oxidase PtAO (CYP720B1) is a multifunctional, multisubstrate cytochrome P450 monooxygenase. Proc. Natl. Acad. Sci. U.S.A. 2005 May 23;102(22):8060–5. doi: 10.1073/pnas.0500825102.; Trapp S, Croteau R. DEFENSIVE RESIN BIOSYNTHESIS IN CONIFERS. Annu. Rev. Plant. Physiol. Plant. Mol. Biol. 2001 Jun;52(1):689–724. doi: 10.1146/annurev.arplant.52.1.689.; Tomlin ES, Antonejevic E, Alfaro RI, Borden JH. Changes in volatile terpene and diterpene resin acid composition of resistant and susceptible white spruce leaders exposed to simulated white pine weevil damage. Tree Physiol. 2000 Oct;20(16):1087–95. doi: 10.1093/treephys/20.16.1087. PMID: 11269960.; Lafever RE, Vogel BS, Croteau R. Diterpenoid Resin Acid Biosynthesis in Conifers: Enzymatic Cyclization of Geranylgeranyl Pyrophosphate to Abietadiene, the Precursor of Abietic Acid. Archives of Biochemistry and Biophysics. 1994 Aug;313(1):139–49. doi: 10.1006/abbi.1994.1370.
dehydroabietic acid biosynthesis Accession ID: PlantCyc:COASTREDWOOD_PWY-5421	-
abietic acid biosynthesis Accession ID: PlantCyc:COASTREDWOOD_PWY-5411	-