Xanthine (BioCAD00000019451)
blood cerebrospinal fluid (csf) feces saliva sweat urine bladder epidermis fibroblasts intestine kidney liver placenta prostate skeletal muscle testis plant natural products microbial natural products
Metabolite Card
Chinese Name: 黄嘌呤
Formula: C5H4N4O2 (152.0334)
SMILES:
O=C1NC2=C(NC=N2)C(=O)N1
Synonyms [en]
xanthine; XAN; Xanthin; Xanthic oxide; 2,6-dioxopurine; 2,6-Dihydroxypurine
Last reviewed on 2026-04-16.
Cite this Page
Xanthine. 数据之源,洞见之始. SMRUCC genomics institute, a synthetic life researcher from China.
https://biocad_registry.innovation.ac.cn/s/Xanthine
(retrieved
2026-08-20) (CAD Registry RN: BioCAD00000019451). Licensed
under the Attribution-Noncommercial 4.0 International License (CC BY-NC 4.0).
Note
Xanthine, also known as 2,6-dioxopurine, belongs to the class of organic compounds known as xanthines. These are purine derivatives with a ketone group conjugated at carbons 2 and 6 of the purine moiety. Xanthine is also classified as an oxopurine. An oxopurine in which the purine ring is substituted by oxo groups at positions 2 and 6 and N-9 is protonated. Xanthine exists in all living species, ranging from bacteria to plants to humans. In plants, several stimulants can be derived from xanthine, including caffeine, theophylline, and theobromine. Derivatives of xanthine (known collectively as xanthines) are a group of alkaloids commonly used for their effects as mild stimulants and as bronchodilators, notably in the treatment of asthma or influenza symptoms. Within humans, xanthine participates in a number of enzymatic reactions. In particular, xanthine can be biosynthesized from guanine; which is mediated by the enzyme guanine deaminase. In addition, xanthine and ribose 1-phosphate can be biosynthesized from xanthosine through the action of the enzyme purine nucleoside phosphorylase. In humans and other primates, xanthine can be converted to uric acid by the action of the xanthine oxidase enzyme. People with rare genetic disorders, specifically xanthinuria and Lesch–Nyhan syndrome, lack sufficient xanthine oxidase and cannot convert xanthine to uric acid. Individuals with xanthinuria have unusually high concentrations of xanthine in their blood and urine, which can lead to health problems such as renal failure and xanthine kidney stones. Individuals with Lesch-Nyhan syndrome have a deficiency of the enzyme hypoxanthine-guanine phosphoribosyltransferase (HGPRT). The HGPRT deficiency causes a build-up of uric acid in all body fluids. This results in both high levels of uric acid in the blood and urine, associated with severe gout and kidney problems. Neurological signs include poor muscle control and moderate intellectual disability.
DBLinks
- CAS Registry Number: 69-89-6
- PubChem CID: 1188
- ChEBI: 17712
- HMDB: HMDB0000292
- LipidMaps:
- KEGG: C00385
- BioCyc: XANTHINE
- NCBI MeSH: Xanthine
- Wikipedia: Xanthine
Other DBLinks
- CAS Registry Number: 1262670-81-4
- CAS Registry Number: 16819-86-6
- CAS Registry Number: 28522-58-9
- CAS Registry Number: 6050-36-8
- CAS Registry Number: 69-89-6
- PubChem: 1188
- ChEBI: ChEBI:17712
- ChEBI: ChEBI:48517
- HMDB: HMDB0000292
- HMDB: HMDB00292
- KEGG: C00385
- BioCyc: XANTHINE
- NCBI MeSH: Xanthine
- Wikipedia: Xanthine
- DrugBank: DB02134
- RefMet: RM0135930
- MoNA: Alkaloids000008
- MoNA: Alkaloids000009
- MoNA: BAF_UVA_POS000444
- MoNA: BAF_UVA_POS000445
- MoNA: BAF_UVA_POS001225
- MoNA: CCMSLIB00000479754
- MoNA: CCMSLIB00000578121
- MoNA: CCMSLIB00005464049
- MoNA: CCMSLIB00005464098
- MoNA: EMBL-MCF_spec17909
- MoNA: EMBL-MCF_spec17922
- MoNA: EMBL_MCF_2_0_HRMS_Library000096
- MoNA: EMBL_MCF_2_0_HRMS_Library000338
- MoNA: FiehnLib001042
- MoNA: HMDB0000292_ms_ms_495
- MoNA: HMDB0000292_ms_ms_496
- MoNA: HMDB0000292_ms_ms_497
- MoNA: MoNA002211
- MoNA: MoNA002212
- MoNA: MoNA002213
- MoNA: MoNA010244
- MoNA: MoNA010245
- MoNA: MoNA010246
- MoNA: MoNA010247
- MoNA: MoNA010248
- MoNA: MoNA010249
- MoNA: MoNA011410
- MoNA: MoNA011411
- MoNA: MoNA011412
- MoNA: MoNA011413
- MoNA: MoNA016816
- MoNA: MoNA024324
- MoNA: MoNA024344
- MoNA: MoNA034465
- MoNA: MoNA034466
- MoNA: MoNA034471
- MoNA: MoNA038023
- MoNA: MT000100
- MoNA: OUF00489
- MoNA: PR100624
- MoNA: PT203730
- MoNA: QE_Alk_neg000007
- MoNA: QE_Alk_neg000008
- MoNA: RP012501
- MoNA: RP012502
- MoNA: RP012503
- MoNA: TOF_alkaloids_neg000006
- MoNA: TOF_alkaloids_pos000008
- Metlin: METLIN_82
- Coconut NaturalProduct: CNP0216695.0
- Coconut NaturalProduct: CNP0329998.0
- Coconut NaturalProduct: CNP0484271.0
- Coconut NaturalProduct: CNP0486449.0
- Coconut NaturalProduct: CNP0583155.0
- PMHub: MS000000628
- metaboanalyst: 3a34ffe37716481ef7e55dd8d3cbd0ac
- metaboanalyst: 4aac3564cbe5414a6b5d0f385159a006
- metaboanalyst: 4d2bb46b7dfbf31b5ba41e270971a1d5
- metaboanalyst: 8362366db0dd4f47c78b5eaabb6cb47d
- metaboanalyst: a95d601f95255ed9bda275f05e94bd9a
- metaboanalyst: f75e0eb86bad4a392f75ccf867c24062
- HERB: HBIN048418
- HERB: HBIN048432
Class / Ontology
- WishartLab ClassyFire: [Purines and purine derivatives] Purines and purine derivatives
- RefMet: [Xanthines] Xanthines
- ChEBI: [CHEBI:17712] 9H-xanthine
- ChEBI: [CHEBI:48517] 7H-xanthine
- Coconut NaturalProduct: [Purine alkaloids] Purine alkaloids
| ID | EC Number | Name |
|---|---|---|
| KEGG:R01676 | 3.5.4.3 | guanine aminohydrolase |
| KEGG:R01768 | 1.17.1.4 | hypoxanthine:NAD+ oxidoreductase |
| KEGG:R01769 | 1.17.3.2 | hypoxanthine:oxygen oxidoreductase |
| KEGG:R02103 | 1.17.1.4 | xanthine:NAD+ oxidoreductase |
| KEGG:R02107 | 1.17.3.2 | xanthine:oxygen oxidoreductase |
| KEGG:R02141 | 3.5.2.- | C00385 + C00001<=>C05515 |
| KEGG:R02142 | 2.4.2.8 | XMP:pyrophosphate phosphoribosyltransferase |
| KEGG:R02143 | 3.2.2.1 | xanthosine ribohydrolase |
| KEGG:R02297 | 2.4.2.1 | xanthosine:orthophosphate ribosyltransferase |
| KEGG:R07965 | 1.14.13.128 | 7-methylxanthine:oxygen oxidoreductase (demethylating) |
| KEGG:R07966 | 1.14.13.128 | 7-methylxanthine:oxygen oxidoreductase (demethylating) |
| KEGG:R07967 | 1.14.13.179 | 3-methylxanthine:oxygen oxidoreductase (N3-demethylating) |
| KEGG:R07968 | 1.14.13.179 | 3-methylxanthine:oxygen oxidoreductase (N3-demethylating) |
| KEGG:R07969 | 1.14.13.178 | 1-methylxanthine:oxygen oxidoreductase (N1-demethylating) |
| KEGG:R07970 | 1.14.13.178 | 1-methylxanthine:oxygen oxidoreductase (N1-demethylating) |
| KEGG:R08410 | C00385 + 2 C00019<=>C07130 + 2 C00021 | |
| KEGG:R10920 | 1.14.11.48 | xanthine,2-oxoglutarate:oxygen oxidoreductase |
| BioCyc:XANTHOSINEPHOSPHORY-RXN | 2.4.2.1 | XANTHOSINE + Pi --> XANTHINE + RIBOSE-1P |
| BioCyc:XANPRIBOSYLTRAN-RXN | 2.4.2.22 | XANTHINE + PRPP --> XANTHOSINE-5-PHOSPHATE + PPI |
| BioCyc:TRANS-RXN2B79-131 | XANTHINE + URACIL --> XANTHINE + URACIL |
Taxonomy Source
- Allolobophora caliginosa [ncbi taxid: ]
- Aloe africana [ncbi taxid: 1080010]
- Aloe ferox [ncbi taxid: 117798]
- Aloe spicata [ncbi taxid: 992642]
- Aloe vera [ncbi taxid: 34199]
- Arisaema amurense [ncbi taxid: 227494]
- Arisaema erubescens [ncbi taxid: 228806]
- Arisaema heterophyllum [ncbi taxid: 227498]
- Camellia sinensis [ncbi taxid: 4442]
- Euryale ferox [ncbi taxid: 4414]
- Ginkgo biloba [ncbi taxid: 3311]
- Homo sapiens [ncbi taxid: 9606]
- Isatis tinctoria [ncbi taxid: 161756]
- Persicaria tinctoria [ncbi taxid: 96455]
- Saccharomyces cerevisiae [ncbi taxid: 4932]
- Ziziphus jujuba [ncbi taxid: 326968]
- Bos taurus domesticus [ncbi taxid: ]
- Camellia sinensis [ncbi taxid: 4442]
- Citrullus lanatus [ncbi taxid: 3654]
- Escherichia coli K12 [ncbi taxid: ]
- FOOD SAKE [ncbi taxid: ]
- Pherethima aspergillum [ncbi taxid: ]
Pathway Synthetic
| pathway id | name |
|---|---|
| BioCyc:HUMAN_PWY-5695 | urate biosynthesis/inosine 5'-phosphate degradation |
| BioCyc:META_PWY-5040 | theobromine biosynthesis II (via xanthine) |
| BioCyc:META_SALVADEHYPOX-PWY | adenosine nucleotides degradation II |
| BioCyc:META_PWY-5044 | purine nucleotides degradation I (plants) |
| BioCyc:META_PWY-5695 | inosine 5'-phosphate degradation |
| BioCyc:META_PWY-5497 | purine nucleobases degradation II (anaerobic) |
| BioCyc:META_PWY-5691 | urate conversion to allantoin I |
| BioCyc:META_PWY-6607 | guanosine nucleotides degradation I |
| BioCyc:ECO_SALVPURINE2-PWY | xanthine and xanthosine salvage |
| BioCyc:SHIGELLA_PWY0-1296 | purine ribonucleosides degradation |
| BioCyc:SHIGELLA_PWY-5695 | urate biosynthesis/inosine 5'-phosphate degradation |
| BioCyc:PLASMO_PWY-6607 | guanosine nucleotides degradation I |
| BioCyc:MTBH37RV_PWY-5695 | inosine 5'-phosphate degradation |
| BioCyc:MTBCDC1551_SALVPURINE2-PWY | xanthine and xanthosine salvage |
| BioCyc:ECOO157_SALVADEHYPOX-PWY | adenosine nucleotides degradation II |
| BioCyc:ECOO157_PWY0-1296 | purine ribonucleosides degradation |
| BioCyc:ECOO157_SALVPURINE2-PWY | xanthine and xanthosine salvage |
| BioCyc:CAULO_SALVADEHYPOX-PWY | adenosine nucleotides degradation II |
| BioCyc:ANTHRA_SALVPURINE2-PWY | xanthine and xanthosine salvage |
| BioCyc:ANTHRA_PWY-6608 | guanosine nucleotides degradation III |