heme b biosynthesis II (anaerobic)

Troup B, Hungerer C, Jahn D. Cloning and characterization of the Escherichia coli hemN gene encoding the oxygen-independent coproporphyrinogen III oxidase. J Bacteriol. 1995 Jun;177(11):3326–31. doi: 10.1128/jb.177.11.3326-3331.1995.

Metabolites

5'-Deoxyadenosine

Formula: C10H13N5O3 (251.10183480000003)

CAS ID: 4754-39-6

CO2

Formula: CO2 (43.98983)

CAS ID: 124-38-9

Fe2+

Formula: Fe (55.934939)

CAS ID: 15438-31-0

H+

Formula: H (1.0078246)

CAS ID: 12408-02-5



Enzyme

EC Number name full name note
1.3.5.3 protoporphyrinogen IX dehydrogenase (quinone) protoporphyrinogen IX:quinone oxidoreductase
1.3.98.3 coproporphyrinogen dehydrogenase coproporphyrinogen-III:S-adenosyl-L-methionine oxidoreductase (decarboxylating)
4.1.1.37 uroporphyrinogen decarboxylase uroporphyrinogen-III carboxy-lyase (coproporphyrinogen-III-forming)
4.98.1.1 protoporphyrin ferrochelatase protoheme ferro-lyase (protoporphyrin-forming)


Pathway Source

Organism Taxonomy Group Enzyme List Source Ratio
Escherichia coli K-12 MAGs 1.3.5.3 / 1.3.98.3 / 4.1.1.37 / 4.98.1.1 100.00%
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 MAGs 1.3.5.3 / 1.3.98.3 / 4.1.1.37 / 4.98.1.1 100.00%
Enterobacter sp. 63 MAGs 1.3.5.3 / 1.3.98.3 / 4.1.1.37 / 4.98.1.1 100.00%
Aeromonas salmonicida subsp. salmonicida MAGs 1.3.5.3 / 1.3.98.3 / 4.1.1.37 / 4.98.1.1 100.00%
Bradyrhizobium diazoefficiens USDA 110 MAGs 1.3.98.3 / 4.1.1.37 / 4.98.1.1 75.00%
Trichodesmium erythraeum IMS101 MAGs 1.3.98.3 / 4.1.1.37 / 4.98.1.1 75.00%
Helicobacter pylori J99 MAGs 1.3.98.3 / 4.1.1.37 / 4.98.1.1 75.00%
Escherichia coli O157:H7 MAGs 1.3.5.3 / 4.1.1.37 / 4.98.1.1 75.00%
Methylobacillus flagellatus KT MAGs 1.3.98.3 / 4.1.1.37 / 4.98.1.1 75.00%
Escherichia coli CFT073 MAGs 1.3.5.3 / 4.1.1.37 / 4.98.1.1 75.00%
Streptomyces albogriseolus bacteria 1.3.5.3 / 4.1.1.37 / 4.98.1.1 75.00%
Synechocystis sp. PCC 6803 bacteria 1.3.98.3 / 4.1.1.37 / 4.98.1.1 75.00%
Helicobacter pylori 26695 MAGs 1.3.98.3 / 4.1.1.37 / 4.98.1.1 75.00%
Salmonella enterica subsp. enterica serovar Typhi MAGs 1.3.98.3 / 4.1.1.37 / 4.98.1.1 75.00%
Cupriavidus necator H16 MAGs 1.3.98.3 / 4.1.1.37 / 4.98.1.1 75.00%
Paraburkholderia graminis bacteria 1.3.98.3 / 4.1.1.37 / 4.98.1.1 75.00%
Bacillus subtilis subsp. subtilis str. 168 MAGs 1.3.98.3 / 4.1.1.37 / 4.98.1.1 75.00%
Aquifex aeolicus VF5 MAGs 1.3.98.3 / 4.1.1.37 / 4.98.1.1 75.00%
Rhodopseudomonas palustris CGA009 MAGs 1.3.98.3 / 4.1.1.37 / 4.98.1.1 75.00%
Pseudomonas syringae pv. syringae MAGs 1.3.98.3 / 4.1.1.37 / 4.98.1.1 75.00%